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New design for dg-predictor and pathway-search #39

Merged
merged 14 commits into from
Jan 8, 2025
Merged

New design for dg-predictor and pathway-search #39

merged 14 commits into from
Jan 8, 2025

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ckouder
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@ckouder ckouder commented Jul 29, 2024

  • dg-predictor
    • Allow users to add novel molecules and automatically assign molecule number to each unique novel molecule
    • result page
      • allow row expansion for reaction info display
      • removed Enzyme Selection Button
      • update reaction status
  • pathway-search result page
    • interact with entire pathway
      • Click the vertical tab on the left side to open the reaction list.
      • When your cursor hovers over the light blue background section, a reminder will appear below to instruct you to click anywhere within this section to reveal the reaction list.
    • Interacting with a molecule structure image
      • when user hovering a molecule structure image, the molecule info card shows up
    • Interacting with a specific reaction in a pathway
      • hovering the reaction chip to quick view the cofactors.
      • click on the eye icon to open up the reaction list, and highlight that specific reaction.

@ckouder ckouder requested a review from matthewberry July 29, 2024 17:43
@ckouder ckouder merged commit dea9d0c into main Jan 8, 2025
1 check passed
ckouder added a commit that referenced this pull request Jan 17, 2025
@ckouder
Squashed commit of the following:
8e87ddc 
commit dedbe8f
Author: ckouder <[email protected]>
Date:   Fri Jan 17 16:01:28 2025 -0600

    enz-rank use precompute results

commit 1e980ca
Author: ckouder <[email protected]>
Date:   Fri Jan 17 15:56:09 2025 -0600

    dg-predictor precompute results

commit 9c5d79f
Author: ckouder <[email protected]>
Date:   Fri Jan 17 15:49:07 2025 -0600

    pathway search: fix whitespace

commit ecaf2a1
Author: ckouder <[email protected]>
Date:   Fri Jan 17 15:38:55 2025 -0600

    pathway-search precompute example

commit 1ae5359
Author: ckouder <[email protected]>
Date:   Fri Jan 17 15:32:21 2025 -0600

    update button text for pre-computed results

commit c1c8631
Author: ckouder <[email protected]>
Date:   Fri Jan 17 15:15:40 2025 -0600

    overall-stoichiometry precompute example

commit 20ba57f
Author: ckouder <[email protected]>
Date:   Fri Jan 17 15:14:18 2025 -0600

    hide login button

commit dea9d0c
Merge: eee30cd 2da924f
Author: ckouder <[email protected]>
Date:   Wed Jan 8 15:38:12 2025 -0600

    Merge pull request #39 from moleculemaker/dev

    New design for dg-predictor and pathway-search

commit eee30cd
Author: Sara Lambert <[email protected]>
Date:   Tue Aug 27 17:31:04 2024 -0500

    Migrate Traefik Middlewares to new CRD

commit 2da924f
Author: ckouder <[email protected]>
Date:   Mon Jul 29 16:31:23 2024 -0500

    fix filter on pathway search

commit f9a0bdb
Author: ckouder <[email protected]>
Date:   Mon Jul 29 13:07:15 2024 -0500

    fix dg-predictor example; update reaction popup display

commit 58bc62c
Author: ckouder <[email protected]>
Date:   Mon Jul 29 12:21:30 2024 -0500

    allow reuse existing novel molecule

commit 0aa8890
Merge: dad220f ff40a83
Author: ckouder <[email protected]>
Date:   Mon Jul 29 10:05:13 2024 -0500

    Merge branch 'feat/dg-predictor-new-design' into dev

commit dad220f
Author: ckouder <[email protected]>
Date:   Sun Jul 28 23:37:56 2024 -0500

    apply new design to pathway-search-result

commit f953d03
Author: ckouder <[email protected]>
Date:   Sun Jul 28 17:21:09 2024 -0500

    add hover effect for table row

commit ff40a83
Author: ckouder <[email protected]>
Date:   Sun Jul 28 16:04:57 2024 -0500

    update look and feel of result

commit 208524c
Author: ckouder <[email protected]>
Date:   Sun Jul 28 16:03:49 2024 -0500

    fix: use example should not update type

commit f54c424
Author: ckouder <[email protected]>
Date:   Sun Jul 28 15:57:36 2024 -0500

    result page display

commit 0c3a1b3
Author: ckouder <[email protected]>
Date:   Fri Jul 12 10:30:38 2024 -0500

    WIP: add reaction image

commit ed11b85
Author: ckouder <[email protected]>
Date:   Thu Jul 11 17:04:37 2024 -0500

    enable example

commit e590922
Author: ckouder <[email protected]>
Date:   Thu Jul 11 17:01:35 2024 -0500

    enable request sending

commit 4451327
Author: ckouder <[email protected]>
Date:   Thu Jul 11 16:17:56 2024 -0500

    new dg-predictor input page

commit 558fe8d
Author: ckouder <[email protected]>
Date:   Thu Jul 11 16:10:33 2024 -0500

    new dg-predictor design

commit e40bba3
Merge: b7b1896 7f5c2af
Author: ckouder <[email protected]>
Date:   Fri Jul 12 09:40:33 2024 -0500

    Merge pull request #38 from moleculemaker/feat/loading-page-tweak

    Feat/loading page tweak

commit 7f5c2af
Author: ckouder <[email protected]>
Date:   Fri Jul 5 14:04:19 2024 -0500

    remove unused function

commit 20e56c0
Author: ckouder <[email protected]>
Date:   Fri Jul 5 14:01:24 2024 -0500

    show error when job failed

commit b5c20dd
Author: ckouder <[email protected]>
Date:   Fri Jul 5 13:14:11 2024 -0500

    allow open novostoic on new tab

commit 9bc33ad
Author: ckouder <[email protected]>
Date:   Fri Jul 5 11:19:50 2024 -0500

    dg-predictors runs on multiple reactions

commit b340a2d
Merge: 776b62f 3caeadd
Author: ckouder <[email protected]>
Date:   Thu Jul 4 15:37:05 2024 -0500

    Merge branch 'chore/minor-tweaks' into feat/loading-page-tweak

commit 3caeadd
Author: ckouder <[email protected]>
Date:   Thu Jul 4 15:36:49 2024 -0500

    chore: display none when no enzyme found

commit 776b62f
Author: ckouder <[email protected]>
Date:   Thu Jul 4 15:28:33 2024 -0500

    feat: add loading page countdown

commit cb96ddd
Author: ckouder <[email protected]>
Date:   Wed Jul 3 10:52:23 2024 -0500

    add rule display

commit 626d2b0
Author: ckouder <[email protected]>
Date:   Wed Jul 3 10:51:26 2024 -0500

    display reaction rule
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