FloPy Modflow6 continuous integration #314
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| name: FloPy Modflow6 continuous integration | |
| on: | |
| schedule: | |
| - cron: '0 8 * * *' # run at 8 AM UTC (12 am PST) | |
| push: | |
| branches: | |
| - master | |
| - develop | |
| - release* | |
| - ci-diagnose* | |
| pull_request: | |
| branches: | |
| - master | |
| - develop | |
| jobs: | |
| test: | |
| name: Modflow6 FloPy tests | |
| runs-on: ubuntu-latest | |
| strategy: | |
| fail-fast: false | |
| defaults: | |
| run: | |
| shell: bash | |
| steps: | |
| - name: Checkout flopy repo | |
| uses: actions/checkout@v3 | |
| - name: Setup Python | |
| uses: actions/setup-python@v4 | |
| with: | |
| python-version: 3.9 | |
| cache: 'pip' | |
| cache-dependency-path: pyproject.toml | |
| - name: Install Python dependencies | |
| run: | | |
| pip install --upgrade pip | |
| pip install https://github.com/modflowpy/pymake/zipball/master | |
| pip install https://github.com/Deltares/xmipy/zipball/develop | |
| pip install https://github.com/MODFLOW-USGS/modflowapi/zipball/develop | |
| pip install .[test,optional] | |
| - name: Install gfortran | |
| uses: modflowpy/install-gfortran-action@v1 | |
| - name: Checkout MODFLOW 6 | |
| uses: actions/checkout@v3 | |
| with: | |
| repository: MODFLOW-USGS/modflow6 | |
| path: modflow6 | |
| - name: Update flopy MODFLOW 6 classes | |
| working-directory: modflow6/autotest | |
| run: | | |
| python update_flopy.py | |
| - name: Install meson | |
| run: | | |
| pip3 install meson ninja | |
| - name: Setup modflow | |
| working-directory: modflow6 | |
| run: | | |
| meson setup builddir --buildtype=debugoptimized --prefix=$(pwd) --libdir=bin | |
| - name: Build modflow | |
| working-directory: modflow6 | |
| run: | | |
| meson compile -C builddir | |
| - name: Install modflow | |
| working-directory: modflow6 | |
| run: | | |
| meson install -C builddir | |
| - name: Get executables | |
| working-directory: modflow6/autotest | |
| env: | |
| GITHUB_TOKEN: ${{ github.token }} | |
| run: | | |
| pytest -v --durations=0 get_exes.py | |
| - name: Run tests | |
| working-directory: modflow6/autotest | |
| run: | | |
| pytest -v -n auto -k "test_gw" --durations=0 --cov=flopy --cov-report=xml | |
| - name: Print coverage report before upload | |
| working-directory: ./modflow6/autotest | |
| run: | | |
| coverage report | |
| - name: Upload coverage to Codecov | |
| if: | |
| github.repository_owner == 'modflowpy' && (github.event_name == 'push' || github.event_name == 'pull_request') | |
| uses: codecov/codecov-action@v3 | |
| with: | |
| files: ./modflow6/autotest/coverage.xml |