wip

milaboratory · Oct 31, 2024 · 0934c2c · 0934c2c
1 parent 590c663
commit 0934c2c
Showing 1 changed file with 20 additions and 20 deletions.
diff --git a/src/main/resources/presets/protocols/bruker.yaml b/src/main/resources/presets/protocols/bruker.yaml
@@ -49,26 +49,26 @@
     consensus:
       inheritFrom: mitool-consensus-1-steps
       overrides:
-        groupingTagTypes:
-          - Cell
-        payloadTagTypes:
-          - Targets
-        parameters:
-          maxIterationsPerConsensus: 90
-          useWeightsForRecordsPerConsensus: false
-          aAssemblerParameters:
-            bandWidth: 4
-            scoring:
-              alphabet: nucleotide
-              subsMatrix: "simple(match = 5, mismatch = -10)"
-              gapPenalty: -19
-            minAlignmentScore: 60
-            maxNormalizedAlignmentPenalty: 0.4
-          positiveMinQualityShare: 0.21
-          positiveMinIntersectionQuality: 238
-          minRecordSharePerConsensus: 0.01
-          minRecordsPerConsensus: 0
-          maxConsensuses: 0
+        - groupingTagTypes:
+            - Cell
+          payloadTagTypes:
+            - Targets
+          parameters:
+            maxIterationsPerConsensus: 90
+            useWeightsForRecordsPerConsensus: false
+            aAssemblerParameters:
+              bandWidth: 4
+              scoring:
+                alphabet: nucleotide
+                subsMatrix: "simple(match = 5, mismatch = -10)"
+                gapPenalty: -19
+              minAlignmentScore: 60
+              maxNormalizedAlignmentPenalty: 0.4
+            positiveMinQualityShare: 0.21
+            positiveMinIntersectionQuality: 238
+            minRecordSharePerConsensus: 0.01
+            minRecordsPerConsensus: 0
+            maxConsensuses: 0
   align:
     inheritFrom: align-single-cell
     overrides: