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mgaynor1 · Jul 18, 2024 · f1db9b1 · f1db9b1
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diff --git a/README.md b/README.md
@@ -48,10 +48,12 @@ For implementation, see our [Basic Example](https://mlgaynor.com/nQuack/articles
 
 ## References 
 
-Gaynor ML, Landis JB, O’Connor TK, Laport RG, Doyle JJ, Soltis DE, Ponciano JM, and Soltis PS. nQuack: An R package for predicting ploidy level from sequence data using site-based heterozygosity. <i>In Review</i>. See preprint on bioRxiv, [doi.org: 10.1101/2024.02.12.579894](https://www.biorxiv.org/content/10.1101/2024.02.12.579894v1)
+Gaynor ML, Landis JB, O’Connor TK, Laport RG, Doyle JJ, Soltis DE, Ponciano JM, and Soltis PS. 2024. nQuack: An R package for predicting ploidy level from sequence data using site-based heterozygosity. *Applications in Plant Sciences* 12(4):e11606. [doi: 10.1002/aps3.11606](https://www.doi.org/10.1002/aps3.11606)
 
 
 ## Up Next:
 
-- If you have sequence data with known ploidal level for a mixed-ploidy system, let us know. We would love to collaborate with you.   
+- If you have sequence data with known plodial level for a mixed-ploidy system, let us know. We would love to collaborate with you. To be included in v2.0, please send me an email at shellyleegaynor at gmail.  
+
+
 
diff --git a/docs/authors.html b/docs/authors.html
diff --git a/docs/index.html b/docs/index.html
diff --git a/docs/pkgdown.yml b/docs/pkgdown.yml
@@ -7,7 +7,7 @@ articles:
   ModelOptions: ModelOptions.html
   Outliers: Outliers.html
   SimulateData: SimulateData.html
-last_built: 2024-05-02T20:00Z
+last_built: 2024-07-17T23:58Z
 urls:
   reference: http://mlgaynor.com/nQuack/reference
   article: http://mlgaynor.com/nQuack/articles

diff --git a/docs/search.json b/docs/search.json
diff --git a/inst/CITATION b/inst/CITATION
@@ -1,9 +1,11 @@
 bibentry(bibtype    = "Article",
          title      = "nQuack: An R package for predicting ploidal level from sequence data using site-based heterozygosity",
           year      = "2024",
-          journal   = "bioRxiv",
-          publisher = "Cold Spring Harbor Laboratory",
-          doi       = "10.1101/2024.02.12.579894",
+          journal   = "Applications in Plant Sciences",
+          doi       = "10.1002/aps3.11606",
+          pages     = "e11606",
+          volume = "12",
+          number = "4",
           author    = c(person(given  = "Michelle L.",
                                family = "Gaynor",
                                email  = "[email protected]"),