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napari-mm3

License PyPI Python Version tests codecov napari hub

a plugin for mother machine image analysis


This napari plugin was generated with Cookiecutter using @napari's cookiecutter-napari-plugin template.

Installation

Install anaconda through https://docs.anaconda.com/anaconda/install/

Clone https://github.com/ahirsharan/napari-mm3

Open Terminal and run:

conda create -y -n napari-env -c conda-forge python=3.9

conda activate napari-env

conda install -c conda-forge napari

pip install -r requirements.txt

In napari window, Plugins-> Install/Uninstall plugins -> drag and drop the cloned folder and hit install. The napari-mm3 plugin should now be visible in the plugins list.

Contributing

Contributions are very welcome. Tests can be run with tox, please ensure the coverage at least stays the same before you submit a pull request.

License

Distributed under the terms of the BSD-3 license, "napari-mm3" is free and open source software

Issues

If you encounter any problems, please file an issue along with a detailed description.

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