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.Rhistory
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.Rhistory
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library(devtools)
install_github('simrR','mblanche')
install_github('simrR','mblanche')
exit
q()
n
library(devtools)
load_all()
ls()
ls(2)
dir <- "~/genomic_analysis/Chabot/bam/"
library(Rsamtools)
BFL <- BamFileList(list.files(dir,"\\.bam$",full=TRUE))
BFL
BFL <- BFL[1]
lib.strand <- 'none'
nCores <- 16
q()
n
library(devtools)
install_github('simrR','mblanche')
q()
n
library(devtools)
install_github('simrR','mblanche')
q()
n
library(devtools)
install_github('simrR','mblanche')
bams2bw
library(devtools)
library(devtools)
install('simrR')
setwd("..")
install('simrR')
install('simrR')
install('simrR')
paths(BFL[[1]])
paths(BFL)
path(BFL)
BFL
q()
nn
q()
n
install('simrR')
library(devtools)
install('simrR')
getwd()
sewd('..')
setwd('..')
install('simrR')
q()
n
setwd)"..")
setwd("..")
library(devtools)
install('simrR')
install('simrR')
install('simrR')
?stopifnot
?stop
length(BFL)
?is
library(Rsamtools)
is(BFL,'BamFileList')
BFL <- vector()
is(BFL,'BamFileList')
getwd()
q()
n
setwd("..")
library(devtools)
install("simrR")
install_github('simrR','mblanche')
?install_github
install_github('simrR','mblanche')
library(devtools)
install()
q()
library(devtools)
install()
library(devtools)
install(simrR)
install()
library(GenomicRanges)
install()
q()
n
library(devtools)
install()
q()\
1()
n
q()
n
library(devtools)
install()
library(devtools)
install()
q()
n
library(devtools)
install()
library(devtools)
install()
library(devtools)
install()
library(devtools)
install()
install()
q()
n