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Quarto GHA Workflow Runner committed Nov 21, 2023
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2 changes: 1 addition & 1 deletion .nojekyll
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784 changes: 784 additions & 0 deletions combine.html
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75 changes: 58 additions & 17 deletions process.html → create.html
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<meta name="viewport" content="width=device-width, initial-scale=1.0, user-scalable=yes">


<title>MarineSDMs - Process</title>
<title>MarineSDMs - Create SDM</title>
<style>
code{white-space: pre-wrap;}
span.smallcaps{font-variant: small-caps;}
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<button type="button" class="quarto-btn-toggle btn" data-bs-toggle="collapse" data-bs-target="#quarto-sidebar,#quarto-sidebar-glass" aria-controls="quarto-sidebar" aria-expanded="false" aria-label="Toggle sidebar navigation" onclick="if (window.quartoToggleHeadroom) { window.quartoToggleHeadroom(); }">
<i class="bi bi-layout-text-sidebar-reverse"></i>
</button>
<nav class="quarto-page-breadcrumbs" aria-label="breadcrumb"><ol class="breadcrumb"><li class="breadcrumb-item"><a href="./process.html">Process</a></li></ol></nav>
<nav class="quarto-page-breadcrumbs" aria-label="breadcrumb"><ol class="breadcrumb"><li class="breadcrumb-item"><a href="./create.html">Create SDM</a></li></ol></nav>
<a class="flex-grow-1" role="button" data-bs-toggle="collapse" data-bs-target="#quarto-sidebar,#quarto-sidebar-glass" aria-controls="quarto-sidebar" aria-expanded="false" aria-label="Toggle sidebar navigation" onclick="if (window.quartoToggleHeadroom) { window.quartoToggleHeadroom(); }">
</a>
<button type="button" class="btn quarto-search-button" aria-label="" onclick="window.quartoOpenSearch();">
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</li>
<li class="sidebar-item sidebar-item-section">
<div class="sidebar-item-container">
<a href="./process.html" class="sidebar-item-text sidebar-link active">
<span class="menu-text">Process</span></a>
<a href="./create.html" class="sidebar-item-text sidebar-link active">
<span class="menu-text">Create SDM</span></a>
<a class="sidebar-item-toggle text-start" data-bs-toggle="collapse" data-bs-target="#quarto-sidebar-section-1" aria-expanded="true" aria-label="Toggle section">
<i class="bi bi-chevron-right ms-2"></i>
</a>
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<li class="sidebar-item">
<div class="sidebar-item-container">
<a href="./prep-data.html" class="sidebar-item-text sidebar-link">
<span class="menu-text"><span class="chapter-number">2</span>&nbsp; <span class="chapter-title">Prep Data</span></span></a>
<span class="menu-text"><span class="chapter-number">2</span>&nbsp; <span class="chapter-title">Prepare Data</span></span></a>
</div>
</li>
<li class="sidebar-item">
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</li>
<li class="sidebar-item">
<div class="sidebar-item-container">
<a href="./ensemble.html" class="sidebar-item-text sidebar-link">
<span class="menu-text"><span class="chapter-number">4</span>&nbsp; <span class="chapter-title">Ensemble</span></span></a>
</div>
</li>
</ul>
</li>
<li class="sidebar-item sidebar-item-section">
<div class="sidebar-item-container">
<a href="./combine.html" class="sidebar-item-text sidebar-link">
<span class="menu-text">Combine SDMs</span></a>
<a class="sidebar-item-toggle text-start" data-bs-toggle="collapse" data-bs-target="#quarto-sidebar-section-2" aria-expanded="true" aria-label="Toggle section">
<i class="bi bi-chevron-right ms-2"></i>
</a>
</div>
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<li class="sidebar-item">
<div class="sidebar-item-container">
<a href="./mosaic.html" class="sidebar-item-text sidebar-link">
<span class="menu-text"><span class="chapter-number">4</span>&nbsp; <span class="chapter-title">Mosaic</span></span></a>
<span class="menu-text"><span class="chapter-number">5</span>&nbsp; <span class="chapter-title">Mosaic</span></span></a>
</div>
</li>
<li class="sidebar-item">
<div class="sidebar-item-container">
<a href="./group.html" class="sidebar-item-text sidebar-link">
<span class="menu-text"><span class="chapter-number">6</span>&nbsp; <span class="chapter-title">Group Taxa</span></span></a>
</div>
</li>
<li class="sidebar-item">
<div class="sidebar-item-container">
<a href="./indicators.html" class="sidebar-item-text sidebar-link">
<span class="menu-text"><span class="chapter-number">7</span>&nbsp; <span class="chapter-title">Indicators</span></span></a>
</div>
</li>
</ul>
</li>
<li class="sidebar-item">
<div class="sidebar-item-container">
<a href="./software.html" class="sidebar-item-text sidebar-link">
<span class="menu-text"><span class="chapter-number">5</span>&nbsp; <span class="chapter-title">Software</span></span></a>
<span class="menu-text"><span class="chapter-number">8</span>&nbsp; <span class="chapter-title">Software</span></span></a>
</div>
</li>
<li class="sidebar-item">
<div class="sidebar-item-container">
<a href="./organize.html" class="sidebar-item-text sidebar-link">
<span class="menu-text"><span class="chapter-number">6</span>&nbsp; <span class="chapter-title">Organize</span></span></a>
<span class="menu-text"><span class="chapter-number">9</span>&nbsp; <span class="chapter-title">Organize</span></span></a>
</div>
</li>
<li class="sidebar-item">
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</li>
<li class="sidebar-item sidebar-item-section">
<div class="sidebar-item-container">
<a class="sidebar-item-text sidebar-link text-start" data-bs-toggle="collapse" data-bs-target="#quarto-sidebar-section-2" aria-expanded="true">
<a class="sidebar-item-text sidebar-link text-start" data-bs-toggle="collapse" data-bs-target="#quarto-sidebar-section-3" aria-expanded="true">
<span class="menu-text">Appendices</span></a>
<a class="sidebar-item-toggle text-start" data-bs-toggle="collapse" data-bs-target="#quarto-sidebar-section-2" aria-expanded="true" aria-label="Toggle section">
<a class="sidebar-item-toggle text-start" data-bs-toggle="collapse" data-bs-target="#quarto-sidebar-section-3" aria-expanded="true" aria-label="Toggle section">
<i class="bi bi-chevron-right ms-2"></i>
</a>
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<ul id="quarto-sidebar-section-2" class="collapse list-unstyled sidebar-section depth1 show">
<ul id="quarto-sidebar-section-3" class="collapse list-unstyled sidebar-section depth1 show">
<li class="sidebar-item">
<div class="sidebar-item-container">
<a href="./glossary.html" class="sidebar-item-text sidebar-link">
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<div class="sidebar-item-container">
<a href="./explorations.html" class="sidebar-item-text sidebar-link">
<span class="menu-text">Explorations</span></a>
<a class="sidebar-item-toggle text-start collapsed" data-bs-toggle="collapse" data-bs-target="#quarto-sidebar-section-3" aria-expanded="false" aria-label="Toggle section">
<a class="sidebar-item-toggle text-start collapsed" data-bs-toggle="collapse" data-bs-target="#quarto-sidebar-section-4" aria-expanded="false" aria-label="Toggle section">
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</a>
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<ul id="quarto-sidebar-section-3" class="collapse list-unstyled sidebar-section depth2 ">
<ul id="quarto-sidebar-section-4" class="collapse list-unstyled sidebar-section depth2 ">
<li class="sidebar-item">
<div class="sidebar-item-container">
<a href="./explorations/am-fine.html" class="sidebar-item-text sidebar-link">
<span class="menu-text">AquaMaps Downscaled</span></a>
</div>
</li>
<li class="sidebar-item">
<div class="sidebar-item-container">
<a href="./explorations/am-envelope.html" class="sidebar-item-text sidebar-link">
<span class="menu-text">AquaMaps Envelope</span></a>
</div>
</li>
<li class="sidebar-item">
<div class="sidebar-item-container">
<a href="./explorations/sdm-1_predicts.html" class="sidebar-item-text sidebar-link">
<span class="menu-text">SDM using <code>predicts</code> in R</span></a>
</div>
</li>
</ul>
</li>
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<header id="title-block-header" class="quarto-title-block default">
<div class="quarto-title">
<div class="quarto-title-block"><div><h1 class="title">Process</h1><button type="button" class="btn code-tools-button" id="quarto-code-tools-source"><i class="bi"></i> Code</button></div></div>
<div class="quarto-title-block"><div><h1 class="title">Create SDM</h1><button type="button" class="btn code-tools-button" id="quarto-code-tools-source"><i class="bi"></i> Code</button></div></div>
</div>


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</div>
<div class="nav-page nav-page-next">
<a href="./prep-data.html" class="pagination-link">
<span class="nav-page-text"><span class="chapter-number">2</span>&nbsp; <span class="chapter-title">Prep Data</span></span> <i class="bi bi-arrow-right-short"></i>
<span class="nav-page-text"><span class="chapter-number">2</span>&nbsp; <span class="chapter-title">Prepare Data</span></span> <i class="bi bi-arrow-right-short"></i>
</a>
</div>
</nav><div class="modal fade" id="quarto-embedded-source-code-modal" tabindex="-1" aria-labelledby="quarto-embedded-source-code-modal-label" aria-hidden="true"><div class="modal-dialog modal-dialog-scrollable"><div class="modal-content"><div class="modal-header"><h5 class="modal-title" id="quarto-embedded-source-code-modal-label">Source Code</h5><button class="btn-close" data-bs-dismiss="modal"></button></div><div class="modal-body"><div class="">
<div class="sourceCode" id="cb1" data-shortcodes="false"><pre class="sourceCode markdown code-with-copy"><code class="sourceCode markdown"><span id="cb1-1"><a href="#cb1-1" aria-hidden="true" tabindex="-1"></a><span class="fu"># Process</span></span>
<div class="sourceCode" id="cb1" data-shortcodes="false"><pre class="sourceCode markdown code-with-copy"><code class="sourceCode markdown"><span id="cb1-1"><a href="#cb1-1" aria-hidden="true" tabindex="-1"></a><span class="fu"># Create SDM</span></span>
<span id="cb1-2"><a href="#cb1-2" aria-hidden="true" tabindex="-1"></a></span>
<span id="cb1-5"><a href="#cb1-5" aria-hidden="true" tabindex="-1"></a><span class="in">```{mermaid}</span></span>
<span id="cb1-6"><a href="#cb1-6" aria-hidden="true" tabindex="-1"></a>%%| label: fig<span class="ot">-p</span>rocess</span>
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<div class="nav-footer-left">© <a href="https://bbest.github.io/cv/">Ben Best</a></div>
<div class="nav-footer-center">
&nbsp;
<div class="toc-actions"><div><i class="bi bi-github"></i></div><div class="action-links"><p><a href="https://github.com/marinebon/sdm-book/edit/main/process.qmd" class="toc-action">Edit this page</a></p></div></div></div>
<div class="toc-actions"><div><i class="bi bi-github"></i></div><div class="action-links"><p><a href="https://github.com/marinebon/sdm-book/edit/main/create.qmd" class="toc-action">Edit this page</a></p></div></div></div>
<div class="nav-footer-right">Built with <a href="https://quarto.org/" target="_blank">Quarto</a></div>
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