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fix LSF submit options
compile and e.coli #603: Commit 5197a57 pushed by skoren
July 24, 2024 15:01 6m 55s master
July 24, 2024 15:01 6m 55s
rewrite layout generation to process ONT+HiFI reads at the same time …
compile and e.coli #602: Commit 365ae53 pushed by skoren
July 24, 2024 14:43 7m 37s graph_cleanup_code
July 24, 2024 14:43 7m 37s
bugfix
compile and e.coli #601: Commit 2224017 pushed by Dmitry-Antipov
July 24, 2024 00:05 6m 39s scaff_multimappers
July 24, 2024 00:05 6m 39s
hairpin resolution bugfix
compile and e.coli #600: Commit 7248729 pushed by maickrau
July 22, 2024 10:03 6m 28s master
July 22, 2024 10:03 6m 28s
Graph cleanup code
compile and e.coli #599: Pull request #270 synchronize by skoren
July 21, 2024 18:57 7m 27s graph_cleanup_code
July 21, 2024 18:57 7m 27s
also conservatively process tip clipping near haploid nodes
compile and e.coli #598: Commit 7f4c5c5 pushed by skoren
July 21, 2024 18:57 7m 13s graph_cleanup_code
July 21, 2024 18:57 7m 13s
distance counting fixed and refactored
compile and e.coli #597: Commit 313006d pushed by Dmitry-Antipov
July 20, 2024 23:46 6m 28s scaff_multimappers
July 20, 2024 23:46 6m 28s
fix for haploid haplotype names
compile and e.coli #596: Commit 8480227 pushed by Dmitry-Antipov
July 19, 2024 20:53 6m 27s scaff_multimappers
July 19, 2024 20:53 6m 27s
Graph cleanup code
compile and e.coli #595: Pull request #270 synchronize by skoren
July 19, 2024 14:49 6m 56s graph_cleanup_code
July 19, 2024 14:49 6m 56s
few fixes
compile and e.coli #594: Commit 88d9cbb pushed by skoren
July 19, 2024 14:49 7m 18s graph_cleanup_code
July 19, 2024 14:49 7m 18s
Graph cleanup code
compile and e.coli #593: Pull request #270 synchronize by skoren
July 18, 2024 20:55 7m 20s graph_cleanup_code
July 18, 2024 20:55 7m 20s
add check for duplicate ONT read ids
compile and e.coli #592: Commit 7048b79 pushed by skoren
July 18, 2024 20:55 7m 2s graph_cleanup_code
July 18, 2024 20:55 7m 2s
Graph cleanup code
compile and e.coli #591: Pull request #270 synchronize by skoren
July 18, 2024 19:31 6m 54s graph_cleanup_code
July 18, 2024 19:31 6m 54s
don't output tigs w/only non-consensus reads
compile and e.coli #590: Commit 1e9053b pushed by skoren
July 18, 2024 19:31 6m 54s graph_cleanup_code
July 18, 2024 19:31 6m 54s
bugfix
compile and e.coli #589: Commit 87d1ec0 pushed by Dmitry-Antipov
July 18, 2024 04:15 6m 19s scaff_multimappers
July 18, 2024 04:15 6m 19s
verkko.sh fixed
compile and e.coli #588: Commit 1a4dda5 pushed by Dmitry-Antipov
July 18, 2024 03:52 6m 48s scaff_multimappers
July 18, 2024 03:52 6m 48s
telomere cheating fixed
compile and e.coli #587: Commit 240e874 pushed by Dmitry-Antipov
July 18, 2024 03:38 5m 7s scaff_multimappers
July 18, 2024 03:38 5m 7s
Graph cleanup code
compile and e.coli #586: Pull request #270 opened by skoren
July 17, 2024 22:29 7m 6s graph_cleanup_code
July 17, 2024 22:29 7m 6s
fx
compile and e.coli #585: Commit 2a577a6 pushed by Dmitry-Antipov
July 17, 2024 22:23 22s scaff_multimappers
July 17, 2024 22:23 22s
update canu and fix buildPackage memory request
compile and e.coli #584: Commit fb6afb7 pushed by skoren
July 17, 2024 21:08 7m 8s graph_cleanup_code
July 17, 2024 21:08 7m 8s
update to master branch
compile and e.coli #583: Commit 024c6d7 pushed by skoren
July 17, 2024 17:48 7m 0s graph_cleanup_code
July 17, 2024 17:48 7m 0s
telomeres fixed, to_scaff removed
compile and e.coli #582: Commit 11b3da6 pushed by Dmitry-Antipov
July 16, 2024 17:16 5m 1s scaff_multimappers
July 16, 2024 17:16 5m 1s
sort the output bam as well
compile and e.coli #581: Commit 9dbd47f pushed by skoren
July 15, 2024 20:20 7m 5s graph_cleanup_code
July 15, 2024 20:20 7m 5s
update tag
compile and e.coli #580: Commit c5f26e4 pushed by skoren
July 15, 2024 14:44 7m 1s graph_cleanup_code
July 15, 2024 14:44 7m 1s
bugfix in unique node estimation
compile and e.coli #579: Commit a7396a5 pushed by maickrau
July 10, 2024 12:09 8m 4s master
July 10, 2024 12:09 8m 4s