Removed pipefail -- no bash in Singularity defs #26
Workflow file for this run
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| name: Singularity Build | |
| on: | |
| push: | |
| tags: | |
| - sif-*-* | |
| jobs: | |
| build-and-push-image: | |
| runs-on: ubuntu-latest | |
| name: Build Apptainer image | |
| permissions: | |
| contents: read | |
| packages: write | |
| steps: | |
| - name: Check out code for the container build | |
| uses: actions/checkout@v4 | |
| - name: Get container name | |
| run: | | |
| cont_name=$(echo "${GITHUB_REF_NAME:-}" | sed -E 's/^sif-//; s/-.*$//') | |
| echo "Container name is ${cont_name:-}" | |
| [ -d "${cont_name:-}" ] || { echo "No container named ${cont_name:-} found."; exit 1; } | |
| echo "cont_name=$cont_name" >> $GITHUB_ENV | |
| - name: Delete GitHub AGENT_TOOLSDIRECTORY to free space | |
| run: | | |
| echo "Disk space before:" && df -h | |
| sudo rm -rf /opt/hostedtoolcache; echo "Done removing /opt/hostedtoolcache" | |
| echo "Disk space after:" && df -h | |
| - name: Delete .NET, Android, Haskell tools to free space | |
| run: | | |
| echo "Disk space before:" && df -h | |
| sudo rm -rf /usr/share/dotnet /opt/ghc /usr/local/lib/android && echo "Done removing .NET, Android, and Haskell tools." | |
| echo "Disk space after:" && df -h | |
| - name: Install Apptainer | |
| run: deb=$(curl -w "%{filename_effective}" -LO https://github.com/apptainer/apptainer/releases/download/v1.2.4/apptainer_1.2.4_amd64.deb) && sudo dpkg --install --force-depends "${deb}" && sudo apt-get install --fix-broken --yes --quiet; rm -f "$deb"; unset deb; sudo apt-get clean -yq | |
| - name: Build Container | |
| run: | | |
| echo "Disk space before:" && df -h | |
| pushd "${cont_name}" | |
| echo "Building ${cont_name}.sif" | |
| apptainer build --fakeroot --fix-perms --warn-unused-build-args --build-arg BOOTSTRAP_SOURCE=oras --build-arg BOOTSTRAP_REPO="ghcr.io/${{ github.repository }}" ../${cont_name}.sif Singularity | |
| echo "Built ${cont_name}.sif" | |
| popd | |
| apptainer cache clean -f | |
| echo "Cleaned Apptainer cache" | |
| tag="${tag:-latest}" | |
| echo "Tag is $tag." | |
| echo "tag=$tag" >> $GITHUB_ENV | |
| echo "Disk space after:" && df -h | |
| - name: Login and Deploy Container | |
| run: | | |
| [ -r "${cont_name}.sif" ] || exit 1 | |
| apptainer remote login -u ${{ github.actor }} -p ${{ secrets.GITHUB_TOKEN }} oras://ghcr.io | |
| echo "Pushing ${cont_name}.sif to ghcr.io/${{ github.repository }}/${cont_name}:${tag}" | |
| apptainer push "${cont_name}.sif" oras://ghcr.io/${{ github.repository }}/${cont_name}:${tag} | |
| echo "Pushed ${cont_name}.sif to ghcr.io/${{ github.repository }}/${cont_name}:${tag}" | |
| rm -f "${cont_name}.sif" |