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  1. common common Public

    Scripts to automate myself out of a job!

    Python 1 3

  2. working_with_dna_meth working_with_dna_meth Public

    Pipeline that I use to process DNA methylation data--both theory and implementation included!

    Python 7 4

  3. annotating_proteomes annotating_proteomes Public

    How to annotate protein gene models (e.g. for genome projects)--not just textual annotation of probable gene function, but also with GO terms.

    Python 5

  4. topGO_pipeline topGO_pipeline Public

    How to perform GO term enrichment analysis using topGO (Alexa et al., 2006).

    R 9 3

  5. pdae_dna_meth pdae_dna_meth Public

    Scripts and important data for the manuscript "Intergenerational epigenetic inheritance in reef-building corals"

    Python 3 2

  6. cpgberus cpgberus Public

    Benchmarking different ways to assay methylation levels.

    HTML 2