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  1. bio-phys/PyDHAMed bio-phys/PyDHAMed Public

    Dynamic Histogram Analysis To Determine Free Energies and Rates from Biased Simulations

    Jupyter Notebook 19 7

  2. bio-phys/kinetics-remd bio-phys/kinetics-remd Public

    Extracting kinetics from replica exchange molecular dynamics and related methods that produce discontinuous trajectories.

    Jupyter Notebook 5 3