Test PyPI version via CI #4
Workflow file for this run
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name: PyPI | |
on: | |
# GitHub has started calling new repo's first branch "main" https://github.com/github/renaming | |
# The cookiecutter uses the "--initial-branch" flag when it runs git-init | |
push: | |
branches: | |
- "main" | |
pull_request: | |
branches: | |
- "main" | |
schedule: | |
# Weekly tests run on main by default: | |
# Scheduled workflows run on the latest commit on the default or base branch. | |
# (from https://help.github.com/en/actions/reference/events-that-trigger-workflows#scheduled-events-schedule) | |
- cron: "0 0 * * 0" | |
jobs: | |
test: | |
name: Test on ${{ matrix.os }}, Python ${{ matrix.python-version }} | |
runs-on: ${{ matrix.os }} | |
strategy: | |
matrix: | |
# os: [macOS-latest, ubuntu-latest, windows-latest] # TODO use this when macOS-latest becomes stable again | |
# os: [macOS-13, ubuntu-latest, windows-latest] # TODO macOS-13 fails when building scipy with pip | |
python-version: [3.8, 3.9, "3.10"] | |
steps: | |
- uses: actions/checkout@v4 | |
with: | |
fetch-depth: 0 | |
- name: Checkout latest tag | |
shell: bash | |
run: | | |
TAG=`git describe --tags $(git rev-list --tags --max-count=1)` | |
echo "Latest tag is: $TAG" | |
git checkout tags/$TAG | |
- name: Additional info about the build | |
shell: bash | |
run: | | |
uname -a | |
df -h | |
ulimit -a | |
- name: Install package from PyPI | |
# conda setup requires this special shell | |
shell: bash -l {0} | |
run: | | |
python -m pip install mlcolvar[test] | |
pip list | |
- name: Run tests | |
# conda setup requires this special shell | |
shell: bash -l {0} | |
run: | | |
pytest -v --cov=mlcolvar --cov-report=xml --color=yes mlcolvar/tests/ | |
- name: Run notebook tests | |
# conda setup requires this special shell | |
shell: bash -l {0} | |
if: contains( matrix.os, 'ubuntu' ) | |
run: | | |
pytest -v --nbmake docs/notebooks/ --ignore=docs/notebooks/tutorials/data/ --cov=mlcolvar --cov-append --cov-report=xml --color=yes |