Prep patch release to CRAN

.Rbuildignore

@@ -6,3 +6,4 @@ LICENSE
 ^R/hex\.R$
 ^inst/.*\.png$
 ^CRAN-SUBMISSION$
+^revdep$

cran-comments.md

@@ -1,46 +1,9 @@
-## Response to review 1
-
-Thank you for the thorough review of the package. I have carefully gone through and addressed each point, with only 1 item not address (reason given) and 1 item I cannot identify (explained below).
-
-> Please omit the redundant "Tools for" at the start of your title and description.
-
-I have removed these words from the title and reworded the description in response to this and the following issue.
-
-> If there are references describing the methods in your package, please add these in the description field of your DESCRIPTION file in the form
-> authors (year) <doi:...>
-> authors (year) <arXiv:...>
-> authors (year, ISBN:...)
-> or if those are not available: <[https:...]https:...>
-> with no space after 'doi:', 'arXiv:', 'https:' and angle brackets for auto-linking. (If you want to add a title as well please put it in quotes: "Title")
-
-Key references have been added to the description in the format requested.
-
-> You write information messages to the console that cannot be easily suppressed.
-> It is more R like to generate objects that can be used to extract the information a user is interested in, and then print() that object.
-> Instead of print()/cat() rather use message()/warning() or if(verbose)cat(..) (or maybe stop()) if you really have to write text to the console. (except for print, summary, interactive functions)
-> -> R/CoherentNetworksOfOrder.R; R/CoherentSystemsOfOrder.R; R/ComputeSignature.R; R/MaskedLifetimeInference.R; R/nonParBayesSystemInferencePriorSetsTEST.R
-
-`cat()` has been changed to `message()` in R/CoherentNetworksOfOrder.R and R/CoherentSystemsOfOrder.R. I have also changed it in R/nonParBayesSystemInferencePriorSetsTEST.R although this file is only present for historical archiving and not exported in the namespace.
-
-The only place I have not made the change is in R/ComputeSignature.R. This is because, per the documentation for this function, `cat()` is only used if `frac = TRUE`. The documentation states that (added star emphasis mine):
-
-\item{frac}{if TRUE then the function **prints out** signature elements as fractions **rather than returning** a decimal signature vector}
-
-I hope this is acceptable.
-
-> Please ensure that you do not use more than 2 cores in your examples, vignettes, etc.
-> -> nonParBayesSystemInferencePriorSets-R files
-
-I have looked at this help file multiple times and cannot see where we use more than 1 core. There are multiple references to `cores = 1` (which I did because I was already aware of this rule). I have also monitored the output of `top` during a full R CMD CHECK and it does not exceed 100% of a single core. If the issue persists, please could you let me know where you see more than 1 core specified and I'm happy to fix?
-
-## Comments (submission)
+## R CMD check results
 
- * I am hoping to return this package to CRAN. It was archived due to a dependency {PhaseType} being removed from CRAN, but {PhaseType} is now back on CRAN.
- * I have moved institution since last updating this package, hence the maintainer email address has changed.
- * I have tried to go through as carefully as possible changes to CRAN policy since last submission leading to many changes, apologies if I have missed anything.
+0 errors | 0 warnings | 0 notes
 
-## R CMD check results
+* This is a small patch release primarily to fix a new NOTE which appears for the current r-devel, due to \link{} targets that are outside the current package not being anchored.
 
-0 errors | 0 warnings | 1 note
+## revdepcheck results
 
-The note relates to this being a new submission on CRAN due to prior archiving.
+There are no reverse dependencies.

revdep/.gitignore

@@ -0,0 +1,7 @@
+checks
+library
+checks.noindex
+library.noindex
+cloud.noindex
+data.sqlite
+*.html

revdep/README.md

@@ -0,0 +1,24 @@
+# Platform
+
+|field    |value                                      |
+|:--------|:------------------------------------------|
+|version  |R version 4.4.1 (2024-06-14)               |
+|os       |macOS Sonoma 14.6.1                        |
+|system   |aarch64, darwin20                          |
+|ui       |RStudio                                    |
+|language |(EN)                                       |
+|collate  |en_US.UTF-8                                |
+|ctype    |en_US.UTF-8                                |
+|tz       |Europe/London                              |
+|date     |2024-09-25                                 |
+|rstudio  |2024.09.0+375 Cranberry Hibiscus (desktop) |
+|pandoc   |NA                                         |
+
+# Dependencies
+
+|package           |old   |new   |Δ  |
+|:-----------------|:-----|:-----|:--|
+|ReliabilityTheory |0.3.0 |0.3.1 |*  |
+
+# Revdeps
+

revdep/cran.md

@@ -0,0 +1,7 @@
+## revdepcheck results
+
+We checked 0 reverse dependencies, comparing R CMD check results across CRAN and dev versions of this package.
+
+ * We saw 0 new problems
+ * We failed to check 0 packages
+

revdep/failures.md

@@ -0,0 +1 @@
+*Wow, no problems at all. :)*

revdep/problems.md

@@ -0,0 +1 @@
+*Wow, no problems at all. :)*