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updating docs

updating docs #821

Workflow file for this run

name: Tests
on: [push]
jobs:
tests:
runs-on: ${{ matrix.os }}
timeout-minutes: 30
strategy:
matrix:
os: [ubuntu-latest, macos-latest]
mpi: ["none", openmpi] # mpich
python: [3.9, 3.11]
exclude:
- os: macos-latest
mpi: mpich
python: 3.9
steps:
- name: Checkout
uses: actions/checkout@v2
- name: Setup Python
uses: actions/setup-python@v2
with:
python-version: ${{ matrix.python }}
# Unfortunately we must use different keys to store the same data,
# otherwise GitHub will complain when multiple jobs are going to
# store it
- name: Cache PySM3 data files
id: cache-pysm3
uses: actions/cache@v2
with:
path: ~/pysm3-data
key: pysm3-data-${{ runner.os }}-${{ matrix.python }}-${{ matrix.mpi }}-${{ secrets.CACHE_VERSION }}
- name: Register PySM3 data path
run: |
echo "PYSM_LOCAL_DATA=$HOME/pysm3-data" >> $GITHUB_ENV
- name: Download PySM3 data files
if: steps.cache-pysm3.outputs.cache_hit != 'true'
run: |
rm -rf "$PYSM_LOCAL_DATA" && git clone https://github.com/galsci/pysm-data "$PYSM_LOCAL_DATA"
- name: Install basic dependencies (MPI, FFTW, poetry, IMO)
run: |
./bin/install-deps.sh ${{ matrix.mpi }}
pip install poetry
mkdir -p $HOME/.config/litebird_imo
echo -e "[[repositories]]\nlocation = \"$(pwd)/test/mock_imo/\"\nname = \"Mock IMO\"" | tee $HOME/.config/litebird_imo/imo.toml
- name: Install litebird_sim dependencies
run: |
EXTRAS=""
if [ "${{ matrix.mpi }}" != "none" ]; then
EXTRAS="$EXTRAS -E mpi"
fi
poetry export --without-hashes $EXTRAS -o requirements.txt
pip install --upgrade pip
pip install -r requirements.txt
env:
DUCC0_OPTIMIZATION: none
- name: Install TOAST2
run: |
if [ ${{ matrix.python }} == 3.9 ]; then
pip install toast
fi
- name: Enable rich traceback
continue-on-error: true
run: |
export DESTPATH="$(poetry env info -p)/lib/python${{ matrix.python }}/site-packages/sitecustomize.py"
echo -e "from rich.traceback import install\ninstall(show_locals=True)\n" > "$DESTPATH"
echo "$DESTPATH"
cat "$DESTPATH"
- name: Tests
run: bash ./bin/run_tests.sh
- name: Tests MPICH
if: ${{ matrix.mpi == 'mpich' }}
run: |
for proc in 1 5 9 ; do
echo "Running MPI test ($MPI) with $proc processes"
PYTHONPATH=. mpiexec -n $proc python3 ./test/test_mpi.py
done
- name: Tests OpenMPI
if: ${{ matrix.mpi == 'openmpi' }}
run: |
for proc in 1 2 ; do
echo "Running MPI test ($MPI) with $proc processes"
PYTHONPATH=. mpiexec -n $proc python3 ./test/test_mpi.py
done