Skip to content

Commit

Permalink
share pip_constraints between CI run steps
Browse files Browse the repository at this point in the history
  • Loading branch information
bernstei committed Jul 22, 2024
1 parent c4bd6cf commit 0f92921
Showing 1 changed file with 16 additions and 16 deletions.
32 changes: 16 additions & 16 deletions .github/workflows/pytests.yml
Original file line number Diff line number Diff line change
Expand Up @@ -19,6 +19,7 @@ jobs:
env:
coverage-on-version: "3.9"
use-mpi: True
pip_constraints: ${{ env.home }}/pip_constraints.txt
defaults:
run:
shell: bash -l {0}
Expand All @@ -39,14 +40,13 @@ jobs:
- name: Install dependencies from pip
run: |
export PIP_CONSTRAINTS=$HOME/pip_constraints.txt
echo "numpy<2" > $PIP_CONSTRAINTS
python3 -m pip install -c $PIP_CONSTRAINTS wheel setuptools numpy scipy click matplotlib pyyaml spglib rdkit flake8 pytest pytest-cov requests
echo "numpy<2" >> ${{ env.pip_constraints }}
python3 -m pip install -c ${{ env.pip_constraints }} wheel setuptools numpy scipy click matplotlib pyyaml spglib rdkit flake8 pytest pytest-cov requests
- name: Install latest ASE from pypi
run: |
echo PIP_CONSTRAINTS $PIP_CONSTRAINTS
python3 -m pip install -c $PIP_CONSTRAINTS ase
echo PIP_CONSTRAINTS ${{ env.pip_constraints }}
python3 -m pip install -c ${{ env.pip_constraints }} ase
echo -n "ASE VERSION "
python3 -c "import ase; print(ase.__file__, ase.__version__)"
Expand Down Expand Up @@ -79,46 +79,46 @@ jobs:
git clone https://github.com/phonopy/phonopy
cd phonopy
python3 -m pip install -c $PIP_CONSTRAINTS -e . -vvv
python3 -m pip install -c ${{ env.pip_constraints }} -e . -vvv
cd ..
git clone https://github.com/phonopy/phono3py
cd phono3py
python3 -m pip install -c $PIP_CONSTRAINTS -e . -vvv
python3 -m pip install -c ${{ env.pip_constraints }} -e . -vvv
cd ..
- name: Install Quippy from PyPI
run: python3 -m pip install -c $PIP_CONSTRAINTS quippy-ase
run: python3 -m pip install -c ${{ env.pip_constraints }} quippy-ase

- name: Install xTB (before things that need pandas like MACE and wfl, since it will break pandas-numpy compatibility by downgrading numpy)
run: |
conda install -c conda-forge xtb-python
python3 -m pip install -c $PIP_CONSTRAINTS typing-extensions
python3 -m pip install -c ${{ env.pip_constraints }} typing-extensions
# install pandas now to encourage compatible numpy version after conda regressed it
python3 -m pip install -c $PIP_CONSTRAINTS pandas
python3 -m pip install -c ${{ env.pip_constraints }} pandas
- name: MACE
run: |
echo "search for torch version"
set +o pipefail
torch_version=$( python3 -m pip install -c $PIP_CONSTRAINTS torch== 2>&1 | fgrep 'from versions' | sed -e 's/.* //' -e 's/)//' )
torch_version=$( python3 -m pip install -c ${{ env.pip_constraints }} torch== 2>&1 | fgrep 'from versions' | sed -e 's/.* //' -e 's/)//' )
echo "found torch version $torch_version, installing cpu-only variant"
python3 -m pip install -c $PIP_CONSTRAINTS torch==${torch_version}+cpu -f https://download.pytorch.org/whl/torch_stable.html
python3 -m pip install -c ${{ env.pip_constraints }} torch==${torch_version}+cpu -f https://download.pytorch.org/whl/torch_stable.html
echo "installing mace"
python3 -m pip install -c $PIP_CONSTRAINTS git+https://github.com/ACEsuit/mace.git@main
python3 -m pip install -c ${{ env.pip_constraints }} git+https://github.com/ACEsuit/mace.git@main
python3 -c "import mace; print(mace.__file__)"
- name: Julia and ace fit
run: |
python3 -m pip install -c $PIP_CONSTRAINTS threadpoolctl
python3 -m pip install -c ${{ env.pip_constraints }} threadpoolctl
wget https://julialang-s3.julialang.org/bin/linux/x64/1.8/julia-1.8.1-linux-x86_64.tar.gz
tar xzf julia-1.8.1-linux-x86_64.tar.gz
# note that this hardwires a particular compatible ACE1pack version
echo 'using Pkg; pkg"registry add https://github.com/JuliaRegistries/General"; pkg"registry add https://github.com/JuliaMolSim/MolSim.git"; pkg"add [email protected], ACE1, JuLIP, IPFitting, ASE"' > ace1pack_install.jl
${PWD}/julia-1.8.1/bin/julia ace1pack_install.jl
- name: Install wfl (expyre and universalSOAP are dependencies)
run: python3 -m pip install -c $PIP_CONSTRAINTS .
run: python3 -m pip install -c ${{ env.pip_constraints }} .

- name: Install Quantum Espresso
run: |
Expand Down Expand Up @@ -152,7 +152,7 @@ jobs:
run: |
# this can eaily be turned off if needed
conda install -c conda-forge mpi4py openmpi pytest-mpi
python3 -m pip install -c $PIP_CONSTRAINTS mpipool
python3 -m pip install -c ${{ env.pip_constraints }} mpipool
- name: Install and configure slurm and ExPyRe
run: |
Expand Down

0 comments on commit 0f92921

Please sign in to comment.