Revisions to Sato_Morita_2007.yml on 11 April 2024

Pisum/sativum/studies/Sato_Morita_2007.yml

@@ -3,8 +3,7 @@ classical_locus:
   - I
   - AB303332
 gene_symbols:
-  - SGR
-  - I
+  - PsSGR
 gene_symbol_long: Staygreen
 gene_model_pub_name: AB303332
 gene_model_full_id: pissa.Cameor.gnm1.ann1.Psat2g181040
@@ -14,19 +13,26 @@ curators:
   - Scott Kalberer
 comments:
   - Complementation test confirms that SGR is Mendel's I locus. SGR is a positive regulator of pathways involved in breakdown of chlorophyll via translational or posttranslational regulation of chlorophyll degrading enzymes. The products of SGR are required to separate chlorophyll from the photosynthetic complex, allowing chlorophyll degrading enzymes access to their substrate. The sgr loss-of-function mutation is due to lower expression of the SGR gene and a small insertion that disrupts SGR protein fuction.
-phenotype_synopsis: The recessive phenotype sgr retains a high chlorophyll content during scenesence, causing cotyledons to stay green as they mature and leaves to stay green as they die. PsSGR is a cosmetic stay-green mutant and does not retain the ability to photosynthesize.
+phenotype_synopsis: The recessive phenotype sgr retains a high chlorophyll content during senescence, causing cotyledons to stay green as they mature and leaves to stay green as they die. PsSGR is a cosmetic stay-green mutant and does not retain the ability to photosynthesize.
 traits:
-  - entity_name:
-    entity:
+  - entity_name: chlorophyll catabolic process
+    entity: GO:0015996
+  - entity_name: positive regulation of chlorophyll catabolic process
+    entity: GO:1903648
+  - entity_name: plant embryo cotyledon color
+    entity: TO:0000980
+  - entity_name: leaf senescence trait
+    entity: TO:0000249
 references:
-  - citation: Sato, Morita et. al., 2007
+  - citation: Sato, Morita et al., 2007
     doi: 10.1073/pnas.0705521104
     pmid: 17709752
-  - citation: Armstead, Donnison et. al., 2007
+  - citation: Armstead, Donnison et al., 2007
     doi: 10.1126/science.1132912
     pmid: 17204643
-  - citation: Aubry, Mani et. al., 2008
+  - citation: Aubry, Mani et al., 2008
     doi: 10.1007/s11103-008-9314-8
     pmid: 18301989
   - citation: Hörtensteiner, 2009
     doi: 10.1016/j.tplants.2009.01.002
+    pmid: 19237309