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Add collection of soybean transposable elements/repeats corresponding…
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… with Du, Grant et al. (2010) / SoyTEdb
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StevenCannon-USDA committed Feb 21, 2024
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7 changes: 7 additions & 0 deletions Glycine/max/repeats/Wm82.rpt.C1JW/CHECKSUM.Wm82.rpt.C1JW.md5
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3c71b0eb756eb111dfbba8e51b65f132 ./MANIFEST.Wm82.rpt.C1JW.correspondence.yml
c7e10ef425f34dd481eafd53cd0c7d12 ./README.Wm82.rpt.C1JW.yml
b20a835052e952a20c16e46e975e68fc ./glyma.Wm82.rpt.C1JW.SOY_TEdb.fna.gz
0410ce887e4a7d6951fe8a2a92ed531c ./glyma.Wm82.rpt.C1JW.SOY_TE_LIB.fna.gz
996d01c76b31ebc795ef5c631c441817 ./glyma.Wm82.rpt.C1JW.SOY_TE_LIB_id60.fna.gz
abba7aa2ce3f65a57e8ad03e4f552614 ./CHANGES.Wm82.rpt.C1JW.txt
8297a4079b3267723c40b84e2798ce2c ./MANIFEST.Wm82.rpt.C1JW.descriptions.yml
37 changes: 37 additions & 0 deletions Glycine/max/repeats/Wm82.rpt.C1JW/README.Wm82.rpt.C1JW.yml
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---
identifier: Wm82.rpt.C1JW

provenance: "This repository is considered the primary source for these files. The files here are held as part of the SoyBase and LegumeInfo."

source: "https://soybase.org/data"

synopsis: Genomic repetitive elements for Glycine max, identified in Williams 82 (Wm82) assembly 1, published as part of SoyTEdb

scientific_name: Glycine max

taxid: 3847

scientific_name_abbrev: glyma

genotype:
- Williams 82

description: "This collection contains repetitive elements for Glycine max identified by Du, Grant, Tian et al. (2010)."

original_file_creation_date: "2010-02-17"

local_file_creation_date: "2024-02-21"

dataset_release_date: "2024-02-21"

publication_doi: 10.1186/1471-2164-11-113

contributors: "Du J, Grant D, Tian Z, Nelson RT, Zhu L, Shoemaker RC, Ma J."

data_curators: Rex Nelson, David Grant, Steven Cannon

public_access_level: public

license: Open

keywords: transposable elements, SoyTEdb, soybean, repetitive elements

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