Update annotation MANIFEST files as follows: s/description: mrna.fna.…

…gz/description: Transcript sequences/
legumeinfo · Dec 10, 2024 · 0b703d6 · 0b703d6
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Showing 134 changed files with 134 additions and 134 deletions.
diff --git a/...ynomene/evenia/annotations/CIAT22838.gnm1.ann1.ZM3R/MANIFEST.CIAT22838.gnm1.ann1.ZM3R.yml b/...ynomene/evenia/annotations/CIAT22838.gnm1.ann1.ZM3R/MANIFEST.CIAT22838.gnm1.ann1.ZM3R.yml
@@ -20,7 +20,7 @@
 - name: aesev.CIAT22838.gnm1.ann1.ZM3R.mrna_primary.fna.gz
   description: Transcript sequences - primary only
 - name: aesev.CIAT22838.gnm1.ann1.ZM3R.mrna.fna.gz
-  description: mrna.fna.gz
+  description: Transcript sequences
   applications:
    - mines
 - name: aesev.CIAT22838.gnm1.ann1.ZM3R.protein_primary.faa.gz

diff --git a/Arachis/duranensis/annotations/V14167.gnm1.ann1.cxSM/MANIFEST.V14167.gnm1.ann1.cxSM.yml b/Arachis/duranensis/annotations/V14167.gnm1.ann1.cxSM/MANIFEST.V14167.gnm1.ann1.cxSM.yml
@@ -34,7 +34,7 @@
   prior_names:
    - Aradu.V14167.a1.M1.transcript.fa.lowqual_or_TE
 - name: aradu.V14167.gnm1.ann1.cxSM.mrna.fna.gz
-  description: mrna.fna.gz
+  description: Transcript sequences
   applications:
    - mines
   prior_names:

diff --git a/Arachis/hypogaea/annotations/BaileyII.gnm1.ann1.PQM7/MANIFEST.BaileyII.gnm1.ann1.PQM7.yml b/Arachis/hypogaea/annotations/BaileyII.gnm1.ann1.PQM7/MANIFEST.BaileyII.gnm1.ann1.PQM7.yml
@@ -30,7 +30,7 @@
   prior_names:
    - arahy.BaileyII.mrna_primary.fna.gz
 - name: arahy.BaileyII.gnm1.ann1.PQM7.mrna.fna.gz
-  description: mrna.fna.gz
+  description: Transcript sequences
   applications:
    - mines
   prior_names:

diff --git a/Arachis/hypogaea/annotations/Tifrunner.gnm1.ann1.CCJH/MANIFEST.Tifrunner.gnm1.ann1.CCJH.yml b/Arachis/hypogaea/annotations/Tifrunner.gnm1.ann1.CCJH/MANIFEST.Tifrunner.gnm1.ann1.CCJH.yml
@@ -20,7 +20,7 @@
 - name: arahy.Tifrunner.gnm1.ann1.CCJH.mrna_primary.fna.gz
   description: Transcript sequences - primary only
 - name: arahy.Tifrunner.gnm1.ann1.CCJH.mrna.fna.gz
-  description: mrna.fna.gz
+  description: Transcript sequences
   applications:
    - mines
 - name: arahy.Tifrunner.gnm1.ann1.CCJH.protein_primary.faa.gz

diff --git a/Arachis/hypogaea/annotations/Tifrunner.gnm2.ann1.4K0L/MANIFEST.Tifrunner.gnm2.ann1.4K0L.yml b/Arachis/hypogaea/annotations/Tifrunner.gnm2.ann1.4K0L/MANIFEST.Tifrunner.gnm2.ann1.4K0L.yml
@@ -30,7 +30,7 @@
   prior_names:
    - arahy.Tifrunner.gnm1.ann1.CCJH.transcript_primaryTranscript.fna
 - name: arahy.Tifrunner.gnm2.ann1.4K0L.mrna.fna.gz
-  description: mrna.fna.gz
+  description: Transcript sequences
   applications:
    - mines
   prior_names:

diff --git a/Arachis/hypogaea/annotations/Tifrunner.gnm2.ann2.PVFB/MANIFEST.Tifrunner.gnm2.ann2.PVFB.yml b/Arachis/hypogaea/annotations/Tifrunner.gnm2.ann2.PVFB/MANIFEST.Tifrunner.gnm2.ann2.PVFB.yml
@@ -32,7 +32,7 @@
   prior_names:
    - arahy.Tifrunner.gnm2.ann2.mrna_lowqual.fna.gz
 - name: arahy.Tifrunner.gnm2.ann2.PVFB.mrna.fna.gz
-  description: mrna.fna.gz
+  description: Transcript sequences
   applications:
    - mines
   prior_names:

diff --git a/Arachis/ipaensis/annotations/K30076.gnm1.ann1.J37m/MANIFEST.K30076.gnm1.ann1.J37m.yml b/Arachis/ipaensis/annotations/K30076.gnm1.ann1.J37m/MANIFEST.K30076.gnm1.ann1.J37m.yml
@@ -34,7 +34,7 @@
   prior_names:
    - Araip.K30076.a1.M1.transcript.fa.lowqual_or_TE
 - name: araip.K30076.gnm1.ann1.J37m.mrna.fna.gz
-  description: mrna.fna.gz
+  description: Transcript sequences
   applications:
    - mines
   prior_names:

diff --git a/Arachis/stenosperma/annotations/V10309.gnm1.ann1.CZRZ/MANIFEST.V10309.gnm1.ann1.CZRZ.yml b/Arachis/stenosperma/annotations/V10309.gnm1.ann1.CZRZ/MANIFEST.V10309.gnm1.ann1.CZRZ.yml
@@ -32,7 +32,7 @@
   prior_names:
    - GCF_014773155.1.modID.transcripts_primary.fna.gz
 - name: arast.V10309.gnm1.ann1.CZRZ.mrna.fna.gz
-  description: mrna.fna.gz
+  description: Transcript sequences
   applications:
    - mines
   prior_names:

diff --git a/Cajanus/cajan/annotations/ICPL87119.gnm1.ann1.Y27M/MANIFEST.ICPL87119.gnm1.ann1.Y27M.yml b/Cajanus/cajan/annotations/ICPL87119.gnm1.ann1.Y27M/MANIFEST.ICPL87119.gnm1.ann1.Y27M.yml
@@ -42,7 +42,7 @@
 - name: cajca.ICPL87119.gnm1.ann1.Y27M.mrna_with_TEs.fna.gz
   description: MISSING
 - name: cajca.ICPL87119.gnm1.ann1.Y27M.mrna.fna.gz
-  description: mrna.fna.gz
+  description: Transcript sequences
   applications:
    - mines
 - name: cajca.ICPL87119.gnm1.ann1.Y27M.protein_with_TEs.faa.gz

diff --git a/Cajanus/cajan/annotations/ICPL87119.gnm2.ann1.L3ZH/MANIFEST.ICPL87119.gnm2.ann1.L3ZH.yml b/Cajanus/cajan/annotations/ICPL87119.gnm2.ann1.L3ZH/MANIFEST.ICPL87119.gnm2.ann1.L3ZH.yml
@@ -26,7 +26,7 @@
 - name: cajca.ICPL87119.gnm2.ann1.L3ZH.mrna_primary.fna.gz
   description: Transcript sequences - primary only
 - name: cajca.ICPL87119.gnm2.ann1.L3ZH.mrna.fna.gz
-  description: mrna.fna.gz
+  description: Transcript sequences
   applications:
    - mines
 - name: cajca.ICPL87119.gnm2.ann1.L3ZH.protein_primary.faa.gz

diff --git a/Cercis/canadensis/annotations/ISC453364.gnm3.ann1.3N1M/MANIFEST.ISC453364.gnm3.ann1.3N1M.yml b/Cercis/canadensis/annotations/ISC453364.gnm3.ann1.3N1M/MANIFEST.ISC453364.gnm3.ann1.3N1M.yml
@@ -38,7 +38,7 @@
   prior_names:
    - Ccanadensis_705_V3.1.transcript_primaryTranscriptOnly.fa.gz
 - name: cerca.ISC453364.gnm3.ann1.3N1M.mrna.fna.gz
-  description: mrna.fna.gz
+  description: Transcript sequences
   applications:
    - mines
   prior_names:

diff --git a/...nsis/annotations/ISC453364.gnm3_hap2.ann1.G88H/MANIFEST.ISC453364.gnm3_hap2.ann1.G88H.yml b/...nsis/annotations/ISC453364.gnm3_hap2.ann1.G88H/MANIFEST.ISC453364.gnm3_hap2.ann1.G88H.yml
@@ -40,7 +40,7 @@
   prior_names:
    - CcanadensisHAP2_706_V3.1.transcript_primaryTranscriptOnly.fa.gz
 - name: cerca.ISC453364.gnm3_hap2.ann1.G88H.mrna.fna.gz
-  description: mrna.fna.gz
+  description: Transcript sequences
   applications:
    - mines
   prior_names:

diff --git a/Cercis/chinensis/annotations/GXIB.gnm1.ann1.L8L4/MANIFEST.GXIB.gnm1.ann1.L8L4.yml b/Cercis/chinensis/annotations/GXIB.gnm1.ann1.L8L4/MANIFEST.GXIB.gnm1.ann1.L8L4.yml
@@ -22,7 +22,7 @@
 - name: cerch.GXIB.gnm1.ann1.L8L4.legfed_v1_0.M65K.gfa.tsv.gz
   description: gene family assignments
 - name: cerch.GXIB.gnm1.ann1.L8L4.mrna.fna.gz
-  description: mrna.fna.gz
+  description: Transcript sequences
   applications:
    - mines
   prior_names:

diff --git a/...ta/fasciculata/annotations/ISC494698.gnm1.ann1.G7XW/MANIFEST.ISC494698.gnm1.ann1.G7XW.yml b/...ta/fasciculata/annotations/ISC494698.gnm1.ann1.G7XW/MANIFEST.ISC494698.gnm1.ann1.G7XW.yml
@@ -34,7 +34,7 @@
 - name: chafa.ISC494698.gnm1.ann1.G7XW.mrna_primary.fna.gz
   description: Transcript sequences - primary only
 - name: chafa.ISC494698.gnm1.ann1.G7XW.mrna.fna.gz
-  description: mrna.fna.gz
+  description: Transcript sequences
   applications:
    - mines
 - name: chafa.ISC494698.gnm1.ann1.G7XW.protein_primary.faa.gz

diff --git a/...lata/annotations/ISC494698.gnm1_hap2.ann1.WXZF/MANIFEST.ISC494698.gnm1_hap2.ann1.WXZF.yml b/...lata/annotations/ISC494698.gnm1_hap2.ann1.WXZF/MANIFEST.ISC494698.gnm1_hap2.ann1.WXZF.yml
@@ -46,7 +46,7 @@
   prior_names:
    - Cfasciculatavar_ISC494698HAP2_855_v1.1.transcript_primaryTranscriptOnly.fa.gz
 - name: chafa.ISC494698.gnm1_hap2.ann1.WXZF.mrna.fna.gz
-  description: mrna.fna.gz
+  description: Transcript sequences
   applications:
    - mines
   prior_names:

diff --git a/Chamaecrista/fasciculata/annotations/MN87.gnm1.ann1.LWFM/MANIFEST.MN87.gnm1.ann1.LWFM.yml b/Chamaecrista/fasciculata/annotations/MN87.gnm1.ann1.LWFM/MANIFEST.MN87.gnm1.ann1.LWFM.yml
@@ -21,7 +21,7 @@
 - name: chafa.MN87.gnm1.ann1.LWFM.info_function.txt.gz
   description: MISSING
 - name: chafa.MN87.gnm1.ann1.LWFM.mrna.fna.gz
-  description: mrna.fna.gz
+  description: Transcript sequences
   applications:
    - mines
 - name: chafa.MN87.gnm1.ann1.LWFM.protein.faa.gz

diff --git a/.../arietinum/annotations/CDCFrontier.gnm1.ann1.nRhs/MANIFEST.CDCFrontier.gnm1.ann1.nRhs.yml b/.../arietinum/annotations/CDCFrontier.gnm1.ann1.nRhs/MANIFEST.CDCFrontier.gnm1.ann1.nRhs.yml
@@ -34,7 +34,7 @@
 - name: cicar.CDCFrontier.gnm1.ann1.nRhs.legfed_v1_0.M65K.gfa.tsv.gz
   description: gene family assignments
 - name: cicar.CDCFrontier.gnm1.ann1.nRhs.mrna.fna.gz
-  description: mrna.fna.gz
+  description: Transcript sequences
   applications:
    - mines
 - name: cicar.CDCFrontier.gnm1.ann1.nRhs.protein.faa.gz

diff --git a/.../arietinum/annotations/CDCFrontier.gnm2.ann1.9M1L/MANIFEST.CDCFrontier.gnm2.ann1.9M1L.yml b/.../arietinum/annotations/CDCFrontier.gnm2.ann1.9M1L/MANIFEST.CDCFrontier.gnm2.ann1.9M1L.yml
@@ -26,7 +26,7 @@
 - name: cicar.CDCFrontier.gnm2.ann1.9M1L.mrna_primary.fna.gz
   description: Transcript sequences - primary only
 - name: cicar.CDCFrontier.gnm2.ann1.9M1L.mrna.fna.gz
-  description: mrna.fna.gz
+  description: Transcript sequences
   applications:
    - mines
 - name: cicar.CDCFrontier.gnm2.ann1.9M1L.protein_primary.faa.gz

diff --git a/.../arietinum/annotations/CDCFrontier.gnm3.ann1.NPD7/MANIFEST.CDCFrontier.gnm3.ann1.NPD7.yml b/.../arietinum/annotations/CDCFrontier.gnm3.ann1.NPD7/MANIFEST.CDCFrontier.gnm3.ann1.NPD7.yml
@@ -16,7 +16,7 @@
 - name: cicar.CDCFrontier.gnm3.ann1.NPD7.legfed_v1_0.M65K.gfa.tsv.gz
   description: gene family assignments
 - name: cicar.CDCFrontier.gnm3.ann1.NPD7.mrna.fna.gz
-  description: mrna.fna.gz
+  description: Transcript sequences
   applications:
    - mines
 - name: cicar.CDCFrontier.gnm3.ann1.NPD7.protein.faa.gz

diff --git a/Cicer/arietinum/annotations/ICC4958.gnm2.ann1.LCVX/MANIFEST.ICC4958.gnm2.ann1.LCVX.yml b/Cicer/arietinum/annotations/ICC4958.gnm2.ann1.LCVX/MANIFEST.ICC4958.gnm2.ann1.LCVX.yml
@@ -26,7 +26,7 @@
 - name: cicar.ICC4958.gnm2.ann1.LCVX.mrna_primary.fna.gz
   description: Transcript sequences - primary only
 - name: cicar.ICC4958.gnm2.ann1.LCVX.mrna.fna.gz
-  description: mrna.fna.gz
+  description: Transcript sequences
   applications:
    - mines
 - name: cicar.ICC4958.gnm2.ann1.LCVX.protein_primary.faa.gz

diff --git a/Cicer/echinospermum/annotations/S2Drd065.gnm1.ann1.YZ9H/MANIFEST.S2Drd065.gnm1.ann1.YZ9H.yml b/Cicer/echinospermum/annotations/S2Drd065.gnm1.ann1.YZ9H/MANIFEST.S2Drd065.gnm1.ann1.YZ9H.yml
@@ -16,7 +16,7 @@
 - name: cicec.S2Drd065.gnm1.ann1.YZ9H.legfed_v1_0.M65K.gfa.tsv.gz
   description: gene family assignments
 - name: cicec.S2Drd065.gnm1.ann1.YZ9H.mrna.fna.gz
-  description: mrna.fna.gz
+  description: Transcript sequences
   applications:
    - mines
 - name: cicec.S2Drd065.gnm1.ann1.YZ9H.protein.faa.gz

diff --git a/Cicer/reticulatum/annotations/Besev079.gnm1.ann1.F01Z/MANIFEST.Besev079.gnm1.ann1.F01Z.yml b/Cicer/reticulatum/annotations/Besev079.gnm1.ann1.F01Z/MANIFEST.Besev079.gnm1.ann1.F01Z.yml
@@ -16,7 +16,7 @@
 - name: cicre.Besev079.gnm1.ann1.F01Z.legfed_v1_0.M65K.gfa.tsv.gz
   description: gene family assignments
 - name: cicre.Besev079.gnm1.ann1.F01Z.mrna.fna.gz
-  description: mrna.fna.gz
+  description: Transcript sequences
   applications:
    - mines
 - name: cicre.Besev079.gnm1.ann1.F01Z.protein.faa.gz

diff --git a/Faidherbia/albida/annotations/WAFC.gnm1.ann1.RTP9/MANIFEST.WAFC.gnm1.ann1.RTP9.yml b/Faidherbia/albida/annotations/WAFC.gnm1.ann1.RTP9/MANIFEST.WAFC.gnm1.ann1.RTP9.yml
@@ -13,7 +13,7 @@
   prior_names:
    - Faidherbia_albida.gff
 - name: faial.WAFC.gnm1.ann1.RTP9.mrna.fna.gz
-  description: mrna.fna.gz
+  description: Transcript sequences
   applications:
    - mines
 - name: faial.WAFC.gnm1.ann1.RTP9.protein.faa.gz

diff --git a/Glycine/D3-tomentella/annotations/G1403.gnm1.ann1.XNZQ/MANIFEST.G1403.gnm1.ann1.XNZQ.yml b/Glycine/D3-tomentella/annotations/G1403.gnm1.ann1.XNZQ/MANIFEST.G1403.gnm1.ann1.XNZQ.yml
@@ -22,7 +22,7 @@
 - name: glyd3.G1403.gnm1.ann1.XNZQ.legfed_v1_0.M65K.gfa.tsv.gz
   description: gene family assignments
 - name: glyd3.G1403.gnm1.ann1.XNZQ.mrna.fna.gz
-  description: mrna.fna.gz
+  description: Transcript sequences
   applications:
    - mines
 - name: glyd3.G1403.gnm1.ann1.XNZQ.protein.faa.gz

diff --git a/Glycine/cyrtoloba/annotations/G1267.gnm1.ann1.HRFD/MANIFEST.G1267.gnm1.ann1.HRFD.yml b/Glycine/cyrtoloba/annotations/G1267.gnm1.ann1.HRFD/MANIFEST.G1267.gnm1.ann1.HRFD.yml
@@ -22,7 +22,7 @@
 - name: glycy.G1267.gnm1.ann1.HRFD.legfed_v1_0.M65K.gfa.tsv.gz
   description: gene family assignments
 - name: glycy.G1267.gnm1.ann1.HRFD.mrna.fna.gz
-  description: mrna.fna.gz
+  description: Transcript sequences
   applications:
    - mines
 - name: glycy.G1267.gnm1.ann1.HRFD.protein.faa.gz

diff --git a/Glycine/dolichocarpa/annotations/G1134.gnm1.ann1.4BJM/MANIFEST.G1134.gnm1.ann1.4BJM.yml b/Glycine/dolichocarpa/annotations/G1134.gnm1.ann1.4BJM/MANIFEST.G1134.gnm1.ann1.4BJM.yml
@@ -22,7 +22,7 @@
 - name: glydo.G1134.gnm1.ann1.4BJM.legfed_v1_0.M65K.gfa.tsv.gz
   description: gene family assignments
 - name: glydo.G1134.gnm1.ann1.4BJM.mrna.fna.gz
-  description: mrna.fna.gz
+  description: Transcript sequences
   applications:
    - mines
 - name: glydo.G1134.gnm1.ann1.4BJM.protein.faa.gz

diff --git a/Glycine/falcata/annotations/G1718.gnm1.ann1.2KSV/MANIFEST.G1718.gnm1.ann1.2KSV.yml b/Glycine/falcata/annotations/G1718.gnm1.ann1.2KSV/MANIFEST.G1718.gnm1.ann1.2KSV.yml
@@ -22,7 +22,7 @@
 - name: glyfa.G1718.gnm1.ann1.2KSV.legfed_v1_0.M65K.gfa.tsv.gz
   description: gene family assignments
 - name: glyfa.G1718.gnm1.ann1.2KSV.mrna.fna.gz
-  description: mrna.fna.gz
+  description: Transcript sequences
   applications:
    - mines
 - name: glyfa.G1718.gnm1.ann1.2KSV.protein.faa.gz

diff --git a/Glycine/max/annotations/58-161.gnm1.ann1.HJ1K/MANIFEST.58-161.gnm1.ann1.HJ1K.yml b/Glycine/max/annotations/58-161.gnm1.ann1.HJ1K/MANIFEST.58-161.gnm1.ann1.HJ1K.yml
@@ -33,7 +33,7 @@
   prior_names:
    - Calculated from protein_primary.faa file and HMMs for the legfed_v1_0.M65K gene families
 - name: glyma.58-161.gnm1.ann1.HJ1K.mrna.fna.gz
-  description: mrna.fna.gz
+  description: Transcript sequences
   applications:
    - mines
 - name: glyma.58-161.gnm1.ann1.HJ1K.protein_primary.faa.gz

diff --git a/Glycine/max/annotations/Amsoy.gnm1.ann1.6S5P/MANIFEST.Amsoy.gnm1.ann1.6S5P.yml b/Glycine/max/annotations/Amsoy.gnm1.ann1.6S5P/MANIFEST.Amsoy.gnm1.ann1.6S5P.yml
@@ -33,7 +33,7 @@
   prior_names:
    - Calculated from protein_primary.faa file and HMMs for the legfed_v1_0.M65K gene families
 - name: glyma.Amsoy.gnm1.ann1.6S5P.mrna.fna.gz
-  description: mrna.fna.gz
+  description: Transcript sequences
   applications:
    - mines
 - name: glyma.Amsoy.gnm1.ann1.6S5P.protein_primary.faa.gz

diff --git a/...ne/max/annotations/DongNongNo_50.gnm1.ann1.QSDB/MANIFEST.DongNongNo_50.gnm1.ann1.QSDB.yml b/...ne/max/annotations/DongNongNo_50.gnm1.ann1.QSDB/MANIFEST.DongNongNo_50.gnm1.ann1.QSDB.yml
@@ -33,7 +33,7 @@
   prior_names:
    - Calculated from protein_primary.faa file and HMMs for the legfed_v1_0.M65K gene families
 - name: glyma.DongNongNo_50.gnm1.ann1.QSDB.mrna.fna.gz
-  description: mrna.fna.gz
+  description: Transcript sequences
   applications:
    - mines
 - name: glyma.DongNongNo_50.gnm1.ann1.QSDB.protein_primary.faa.gz

diff --git a/Glycine/max/annotations/FengDiHuang.gnm1.ann1.P6HL/MANIFEST.FengDiHuang.gnm1.ann1.P6HL.yml b/Glycine/max/annotations/FengDiHuang.gnm1.ann1.P6HL/MANIFEST.FengDiHuang.gnm1.ann1.P6HL.yml
@@ -33,7 +33,7 @@
   prior_names:
    - Calculated from protein_primary.faa file and HMMs for the legfed_v1_0.M65K gene families
 - name: glyma.FengDiHuang.gnm1.ann1.P6HL.mrna.fna.gz
-  description: mrna.fna.gz
+  description: Transcript sequences
   applications:
    - mines
 - name: glyma.FengDiHuang.gnm1.ann1.P6HL.protein_primary.faa.gz

diff --git a/Glycine/max/annotations/FiskebyIII.gnm1.ann1.SS25/MANIFEST.FiskebyIII.gnm1.ann1.SS25.yml b/Glycine/max/annotations/FiskebyIII.gnm1.ann1.SS25/MANIFEST.FiskebyIII.gnm1.ann1.SS25.yml
@@ -36,7 +36,7 @@
   prior_names:
    - GmaxFiskeby_678_v1.1.transcript_primaryTranscriptOnly.fa.gz
 - name: glyma.FiskebyIII.gnm1.ann1.SS25.mrna.fna.gz
-  description: mrna.fna.gz
+  description: Transcript sequences
   applications:
    - mines
   prior_names:

diff --git a/Glycine/max/annotations/HanDouNo_5.gnm1.ann1.ZS7M/MANIFEST.HanDouNo_5.gnm1.ann1.ZS7M.yml b/Glycine/max/annotations/HanDouNo_5.gnm1.ann1.ZS7M/MANIFEST.HanDouNo_5.gnm1.ann1.ZS7M.yml
@@ -33,7 +33,7 @@
   prior_names:
    - Calculated from protein_primary.faa file and HMMs for the legfed_v1_0.M65K gene families
 - name: glyma.HanDouNo_5.gnm1.ann1.ZS7M.mrna.fna.gz
-  description: mrna.fna.gz
+  description: Transcript sequences
   applications:
    - mines
 - name: glyma.HanDouNo_5.gnm1.ann1.ZS7M.protein_primary.faa.gz

diff --git a/.../annotations/Hefeng25_IGA1002.gnm1.ann1.320V/MANIFEST.Hefeng25_IGA1002.gnm1.ann1.320V.yml b/.../annotations/Hefeng25_IGA1002.gnm1.ann1.320V/MANIFEST.Hefeng25_IGA1002.gnm1.ann1.320V.yml
@@ -17,7 +17,7 @@
 - name: glyma.Hefeng25_IGA1002.gnm1.ann1.320V.legfed_v1_0.M65K.gfa.tsv.gz
   description: gene family assignments
 - name: glyma.Hefeng25_IGA1002.gnm1.ann1.320V.mrna.fna.gz
-  description: mrna.fna.gz
+  description: Transcript sequences
   applications:
    - mines
 - name: glyma.Hefeng25_IGA1002.gnm1.ann1.320V.protein.faa.gz

diff --git a/Glycine/max/annotations/HeiHeNo_43.gnm1.ann1.PDXG/MANIFEST.HeiHeNo_43.gnm1.ann1.PDXG.yml b/Glycine/max/annotations/HeiHeNo_43.gnm1.ann1.PDXG/MANIFEST.HeiHeNo_43.gnm1.ann1.PDXG.yml
@@ -33,7 +33,7 @@
   prior_names:
    - Calculated from protein_primary.faa file and HMMs for the legfed_v1_0.M65K gene families
 - name: glyma.HeiHeNo_43.gnm1.ann1.PDXG.mrna.fna.gz
-  description: mrna.fna.gz
+  description: Transcript sequences
   applications:
    - mines
 - name: glyma.HeiHeNo_43.gnm1.ann1.PDXG.protein_primary.faa.gz

diff --git a/...ax/annotations/Huaxia3_IGA1007.gnm1.ann1.LKC7/MANIFEST.Huaxia3_IGA1007.gnm1.ann1.LKC7.yml b/...ax/annotations/Huaxia3_IGA1007.gnm1.ann1.LKC7/MANIFEST.Huaxia3_IGA1007.gnm1.ann1.LKC7.yml
@@ -17,7 +17,7 @@
 - name: glyma.Huaxia3_IGA1007.gnm1.ann1.LKC7.legfed_v1_0.M65K.gfa.tsv.gz
   description: gene family assignments
 - name: glyma.Huaxia3_IGA1007.gnm1.ann1.LKC7.mrna.fna.gz
-  description: mrna.fna.gz
+  description: Transcript sequences
   applications:
    - mines
 - name: glyma.Huaxia3_IGA1007.gnm1.ann1.LKC7.protein.faa.gz

diff --git a/Glycine/max/annotations/Hwangkeum.gnm1.ann1.1G4F/MANIFEST.Hwangkeum.gnm1.ann1.1G4F.yml b/Glycine/max/annotations/Hwangkeum.gnm1.ann1.1G4F/MANIFEST.Hwangkeum.gnm1.ann1.1G4F.yml
@@ -24,7 +24,7 @@
 - name: glyma.Hwangkeum.gnm1.ann1.1G4F.mrna_primary.fna.gz
   description: Transcript sequences - primary only
 - name: glyma.Hwangkeum.gnm1.ann1.1G4F.mrna.fna.gz
-  description: mrna.fna.gz
+  description: Transcript sequences
   applications:
    - mines
 - name: glyma.Hwangkeum.gnm1.ann1.1G4F.protein_primary.faa.gz

diff --git a/Glycine/max/annotations/JD17.gnm1.ann1.CLFP/MANIFEST.JD17.gnm1.ann1.CLFP.yml b/Glycine/max/annotations/JD17.gnm1.ann1.CLFP/MANIFEST.JD17.gnm1.ann1.CLFP.yml
@@ -30,7 +30,7 @@
   prior_names:
    - jd17_transcripts_primary.fna.gz
 - name: glyma.JD17.gnm1.ann1.CLFP.mrna.fna.gz
-  description: mrna.fna.gz
+  description: Transcript sequences
   applications:
    - mines
   prior_names:

diff --git a/Glycine/max/annotations/JiDouNo_17.gnm1.ann1.X5PX/MANIFEST.JiDouNo_17.gnm1.ann1.X5PX.yml b/Glycine/max/annotations/JiDouNo_17.gnm1.ann1.X5PX/MANIFEST.JiDouNo_17.gnm1.ann1.X5PX.yml
@@ -33,7 +33,7 @@
   prior_names:
    - Calculated from protein_primary.faa file and HMMs for the legfed_v1_0.M65K gene families
 - name: glyma.JiDouNo_17.gnm1.ann1.X5PX.mrna.fna.gz
-  description: mrna.fna.gz
+  description: Transcript sequences
   applications:
    - mines
 - name: glyma.JiDouNo_17.gnm1.ann1.X5PX.protein_primary.faa.gz

diff --git a/Glycine/max/annotations/JinDouNo_23.gnm1.ann1.SGJW/MANIFEST.JinDouNo_23.gnm1.ann1.SGJW.yml b/Glycine/max/annotations/JinDouNo_23.gnm1.ann1.SGJW/MANIFEST.JinDouNo_23.gnm1.ann1.SGJW.yml
@@ -33,7 +33,7 @@
   prior_names:
    - Calculated from protein_primary.faa file and HMMs for the legfed_v1_0.M65K gene families
 - name: glyma.JinDouNo_23.gnm1.ann1.SGJW.mrna.fna.gz
-  description: mrna.fna.gz
+  description: Transcript sequences
   applications:
    - mines
 - name: glyma.JinDouNo_23.gnm1.ann1.SGJW.protein_primary.faa.gz

diff --git a/...ax/annotations/Jinyuan_IGA1006.gnm1.ann1.2NNX/MANIFEST.Jinyuan_IGA1006.gnm1.ann1.2NNX.yml b/...ax/annotations/Jinyuan_IGA1006.gnm1.ann1.2NNX/MANIFEST.Jinyuan_IGA1006.gnm1.ann1.2NNX.yml
@@ -17,7 +17,7 @@
 - name: glyma.Jinyuan_IGA1006.gnm1.ann1.2NNX.legfed_v1_0.M65K.gfa.tsv.gz
   description: gene family assignments
 - name: glyma.Jinyuan_IGA1006.gnm1.ann1.2NNX.mrna.fna.gz
-  description: mrna.fna.gz
+  description: Transcript sequences
   applications:
    - mines
 - name: glyma.Jinyuan_IGA1006.gnm1.ann1.2NNX.protein.faa.gz

diff --git a/Glycine/max/annotations/JuXuanNo_23.gnm1.ann1.H8PW/MANIFEST.JuXuanNo_23.gnm1.ann1.H8PW.yml b/Glycine/max/annotations/JuXuanNo_23.gnm1.ann1.H8PW/MANIFEST.JuXuanNo_23.gnm1.ann1.H8PW.yml
@@ -33,7 +33,7 @@
   prior_names:
    - Calculated from protein_primary.faa file and HMMs for the legfed_v1_0.M65K gene families
 - name: glyma.JuXuanNo_23.gnm1.ann1.H8PW.mrna.fna.gz
-  description: mrna.fna.gz
+  description: Transcript sequences
   applications:
    - mines
 - name: glyma.JuXuanNo_23.gnm1.ann1.H8PW.protein_primary.faa.gz

diff --git a/Glycine/max/annotations/KeShanNo_1.gnm1.ann1.2YX4/MANIFEST.KeShanNo_1.gnm1.ann1.2YX4.yml b/Glycine/max/annotations/KeShanNo_1.gnm1.ann1.2YX4/MANIFEST.KeShanNo_1.gnm1.ann1.2YX4.yml
@@ -33,7 +33,7 @@
   prior_names:
    - Calculated from protein_primary.faa file and HMMs for the legfed_v1_0.M65K gene families
 - name: glyma.KeShanNo_1.gnm1.ann1.2YX4.mrna.fna.gz
-  description: mrna.fna.gz
+  description: Transcript sequences
   applications:
    - mines
 - name: glyma.KeShanNo_1.gnm1.ann1.2YX4.protein_primary.faa.gz

diff --git a/Glycine/max/annotations/Lee.gnm1.ann1.6NZV/MANIFEST.Lee.gnm1.ann1.6NZV.yml b/Glycine/max/annotations/Lee.gnm1.ann1.6NZV/MANIFEST.Lee.gnm1.ann1.6NZV.yml
@@ -30,7 +30,7 @@
   prior_names:
    - GmaxLee_510_v1.1.transcript_primaryTranscriptOnly.fa
 - name: glyma.Lee.gnm1.ann1.6NZV.mrna.fna.gz
-  description: mrna.fna.gz
+  description: Transcript sequences
   applications:
    - mines
   prior_names: