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Updates to be compatible with spikeinterface==0.101.0
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Lauren M Ostrowski committed Aug 17, 2024
1 parent e823ec0 commit e5bd4b5
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Showing 29 changed files with 11,150 additions and 3,404 deletions.
15 changes: 8 additions & 7 deletions .ipynb_checkpoints/0-reference_files-checkpoint.ipynb
Original file line number Diff line number Diff line change
Expand Up @@ -14,7 +14,7 @@
},
{
"cell_type": "code",
"execution_count": 7,
"execution_count": 1,
"id": "ecd1bc70-88ed-447f-a19f-7f4f3d9530d6",
"metadata": {},
"outputs": [],
Expand All @@ -25,16 +25,16 @@
"from ceciestunepipe.file import bcistructure as et\n",
"\n",
"sess_par = {\n",
" 'bird': 'z_p5y10_23',\n",
" 'sess': '2024-05-17'\n",
" 'bird': 'z_r5r13_24',\n",
" 'sess': '2024-08-08'\n",
"}\n",
"\n",
"rig_dict_path = et.get_exp_struct(sess_par['bird'],sess_par['sess'])['files']['rig']"
]
},
{
"cell_type": "code",
"execution_count": 8,
"execution_count": 2,
"id": "c130bc8c-eb91-4e28-99b5-29ac6269e435",
"metadata": {},
"outputs": [],
Expand All @@ -50,15 +50,16 @@
" 'microphone_M': 'adc-00',\n",
" 'microphone_F': 'adc-05',\n",
" 'wav_stim': 'adc-01',\n",
" 'wav_syn': 'adc-02'},\n",
" 'wav_syn': 'adc-02'\n",
" },\n",
" 'port': {\n",
" 'probe_0': 'A-'\n",
" }\n",
" },\n",
" 'probe': {\n",
" 'probe_0': { # will always be probe_0 unless multiple recordings from different probes on the same day\n",
" 'model': 'NP2013',\n",
" 'serial': '22420012794', # update every time\n",
" 'serial': '22420013432', # update every time\n",
" 'headstage': '23280347'\n",
" }\n",
" }\n",
Expand All @@ -67,7 +68,7 @@
},
{
"cell_type": "code",
"execution_count": 9,
"execution_count": 3,
"id": "8a27aec7-32d6-4523-912f-c0eaaebed071",
"metadata": {},
"outputs": [],
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101 changes: 39 additions & 62 deletions .ipynb_checkpoints/1-preprocess_acoustics-zebra_finch-checkpoint.ipynb

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