DL4H-Project

Semester project for the course Deep Learning for Healthcare (CS598) of UIUC (Spring 2022).

Original paper

Citation

@inproceedings{bidim,

author = {Wang, Weijing and Guo, Chenkai and Xu, Jing and Liu, Ao},

year = {2019},

month = {07},

pages = {374-379},

title = {Bi-Dimensional Representation of Patients for Diagnosis Prediction},

doi = {10.1109/COMPSAC.2019.10235}

}

Repository

Not available

Dependencies

• python 3.6.9
• pytorch
• numpy
• pandas
• pickle
• gensim

Data Availability

Follow the instructions at https://eicu-crd.mit.edu/gettingstarted/access/ to get access to the MIMIC-III Clinical Database.

Model

Result

Implementation

Preprocessing: src/data_prep_1.py and src/data_prep_2.py

Architecture, training and evaluation: src/patient2vec.py and src/patient2vec-w2v.py

Ablation study: src/symptom2vec.py and src/treatment2vec.py