Docs adjustment

docs/source/conf.py

@@ -9,6 +9,9 @@
 # -- Project information -----------------------------------------------------
 # https://www.sphinx-doc.org/en/master/usage/configuration.html#project-information
 import sphinx_rtd_theme
+from aiida.manage.configuration import load_documentation_profile
+
+load_documentation_profile()
 
 project = "aiida-aimall"
 copyright = "2023, Kevin Lefrancois-Gagnon, Robert Mawhinney"

examples/fragmenting_workchain.ipynb

@@ -9,24 +9,15 @@
      "name": "stdout",
      "output_type": "stream",
      "text": [
-      "The aiida extension is already loaded. To reload it, use:\n",
-      "  %reload_ext aiida\n",
       "\u001b[34m\u001b[1mProfile: \u001b[0m\u001b[1mifgtest\u001b[0m\n",
-      "\u001b[22mStopping the daemon... \u001b[0m"
-     ]
-    },
-    {
-     "name": "stdout",
-     "output_type": "stream",
-     "text": [
-      "\u001b[32m\u001b[1mOK\u001b[0m\n",
+      "\u001b[22mStopping the daemon... \u001b[0m\u001b[32m\u001b[1mOK\u001b[0m\n",
       "\u001b[22mStarting the daemon with 1 workers... \u001b[0m\u001b[32m\u001b[1mOK\u001b[0m\n",
       "\u001b[32m\u001b[22m ✔ \u001b[0m\u001b[22mversion:     AiiDA v2.4.0\u001b[0m\n",
       "\u001b[32m\u001b[22m ✔ \u001b[0m\u001b[22mconfig:      /Users/chemlab/.aiida\u001b[0m\n",
       "\u001b[32m\u001b[22m ✔ \u001b[0m\u001b[22mprofile:     ifgtest\u001b[0m\n",
       "\u001b[32m\u001b[22m ✔ \u001b[0m\u001b[22mstorage:     Storage for 'ifgtest' [open] @ postgresql://aiida_qs_chemlab_dc189c6b70baec471ad2f48ee511c206:***@localhost:5432/ifgtest_chemlab_dc189c6b70baec471ad2f48ee511c206 / DiskObjectStoreRepository: 9f7f214d738444e6813917206b8987f5 | /Users/chemlab/.aiida/repository/ifgtest/container\u001b[0m\n",
       "\u001b[32m\u001b[22m ✔ \u001b[0m\u001b[22mrabbitmq:    Connected to RabbitMQ v3.7.28 as amqp://guest:[email protected]:5672?heartbeat=600\u001b[0m\n",
-      "\u001b[32m\u001b[22m ✔ \u001b[0m\u001b[22mdaemon:      Daemon is running with PID 4906\u001b[0m\n"
+      "\u001b[32m\u001b[22m ✔ \u001b[0m\u001b[22mdaemon:      Daemon is running with PID 8543\u001b[0m\n"
      ]
     }
    ],
@@ -111,6 +102,27 @@
     ")"
    ]
   },
+  {
+   "cell_type": "code",
+   "execution_count": 3,
+   "metadata": {},
+   "outputs": [
+    {
+     "name": "stdout",
+     "output_type": "stream",
+     "text": [
+      "\u001b[34m\u001b[1mReport\u001b[0m: \u001b[22mGroup with label 'reor_wfx' already exists: Group<reor_wfx>.\u001b[0m\n"
+     ]
+    }
+   ],
+   "source": [
+    "%verdi group create reor_wfx\n",
+    "%verdi group create aim_reor\n",
+    "%verdi group create gaussian_sp\n",
+    "%verdi group create reor_structs\n",
+    "%verdi group create opt_wfx"
+   ]
+  },
   {
    "cell_type": "code",
    "execution_count": null,