GitHub - klauscj68/ohio-vaccinations: Julia v1.6.0 software suite for performing age-stratified COVID predictions and parameter estimations by Metropolis-within-Gibbs MCMC. Data files are taken from ODH's public website, CDC and US Census.

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Julia v1.6.0 software suite for performing age-stratified COVID predictions and parameter estimations by Metropolis-within-Gibbs MCMC. Data files are taken from ODH's public website, CDC and US Census.

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Name		Name	Last commit message	Last commit date
Latest commit History 58 Commits
Manifest.toml		Manifest.toml
ODH_0909.csv		ODH_0909.csv
Project.toml		Project.toml
VaxCdcSep08_1D.csv		VaxCdcSep08_1D.csv
common.jl		common.jl
contact_matrix_usa.csv		contact_matrix_usa.csv
gibbs.jl		gibbs.jl
odesolver.jl		odesolver.jl
parseODH.py		parseODH.py
postprocess_gibbs.ipynb		postprocess_gibbs.ipynb
readme.txt		readme.txt
run_gibbs.ipynb		run_gibbs.ipynb

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The Jupyter notebooks describe the workflow for running Bayesian inference
of R0 under assortative mixing. The Project and Manifest files encode the 
environment needed to run the code, while example csv data files have been
included for showing the format of the codes input-time series data.