re-adding fhir profiles

kind-lab · Mar 25, 2024 · b3cdb2b · b3cdb2b
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diff --git a/input/fsh/AL_CodeSystem.fsh b/input/fsh/AL_CodeSystem.fsh
diff --git a/input/fsh/SD_VbaiBodyHeight.fsh b/input/fsh/SD_VbaiBodyHeight.fsh
@@ -0,0 +1,8 @@
+Profile:        VbaiBodyHeight
+Parent:         us-core-body-height
+Id:             vbai-body-height
+Title:          "VBAI Body Height"
+Description:    "An observation profile based on US Core Body Height Profile"
+* subject only Reference(VbaiPatient)
+* encounter only Reference(VbaiEncounter)
+* code = $LOINC#8302-2 "Body height"
diff --git a/input/fsh/SD_VbaiBodyWeight.fsh b/input/fsh/SD_VbaiBodyWeight.fsh
@@ -0,0 +1,8 @@
+Profile:        VbaiBodyWeight
+Parent:         us-core-body-weight
+Id:             vbai-body-weight
+Title:          "VBAI Body Weight"
+Description:    "An observation profile based on US Core Body Weight Profile."
+* subject only Reference(VbaiPatient)
+* encounter only Reference(VbaiEncounter)
+* code = $LOINC#29463-7 "Body weight"
diff --git a/input/fsh/SD_VbaiCohortProtocol.fsh b/input/fsh/SD_VbaiCohortProtocol.fsh
@@ -0,0 +1,12 @@
+Profile: VbaiCohortProtocol
+Parent: PlanDefinition
+Id: vbai-cohort-protocol
+Title: "A general template for VBAI protocols"
+Description: "This profile extends PlanDefinition to restrict the number of actions to 12, the number of high-level steps in the VBAI protocol template."
+* status 1..1 MS
+* title 1..1 MS
+* date 1..1 MS
+* action 12..12 MS
+* action.definitionCanonical MS
+* action.definitionCanonical only Canonical(http://hl7.org/fhir/StructureDefinition/PlanDefinition or http://hl7.org/fhir/StructureDefinition/Questionnaire)
+* action.action.definitionCanonical only Canonical(http://hl7.org/fhir/StructureDefinition/PlanDefinition or http://hl7.org/fhir/StructureDefinition/Questionnaire)
diff --git a/input/fsh/SD_VbaiCondition.fsh b/input/fsh/SD_VbaiCondition.fsh
@@ -0,0 +1,8 @@
+Profile:        VbaiCondition
+Parent:         us-core-condition-encounter-diagnosis
+Id:             vbai-condition
+Title:          "VBAI Condition"
+Description:    "A condition profile based on US Core Condition Encounter Diagnosis."
+* subject only Reference(VbaiPatient)
+* encounter only Reference(VbaiEncounter)
+* code 1..1
diff --git a/input/fsh/SD_VbaiConsent.fsh b/input/fsh/SD_VbaiConsent.fsh
@@ -0,0 +1,16 @@
+Profile:        VbaiConsent
+Parent:         Consent
+Id:             vbai-consent
+Title:          "VBAI Consent"
+Description:    "A consent profile based on the base Consent resource"
+* patient only Reference(VbaiPatient)
+* status = $ConsentStateCodes#active "Active"
+* category = $ConsentCategoryCodes#research "Research Information Access"
+// could be other categories found in the valueset: https://www.hl7.org/fhir/R4/valueset-consent-category.html
+* scope = $ConsentScope#research "Research"
+* policyRule = $ConsentPolicyCodes#nih-hipaa "HHS NIH HIPAA Research Authorization"
+// selected nih-hippa but could be one of the codes found in https://www.hl7.org/fhir/valueset-consent-policy.html. 
+
+// * organization --> could be set to just be VoiceCollab/NIH/Bridge2AI (need to decide on what the overarching organization is)
+// * policy --> some policy, this points to a uri
+// * sourceAttachement --> are we including the form this is based on as an attachment? Or referencing a DocumentReference (which just abstracts it another step)
diff --git a/input/fsh/SD_VbaiEncounter.fsh b/input/fsh/SD_VbaiEncounter.fsh
@@ -0,0 +1,7 @@
+Profile:        VbaiEncounter
+Parent:         us-core-encounter
+Id:             vbai-encounter
+Title:          "VBAI Encounter"
+Description:    "An encounter profile based on US Core Encounter."
+* subject only Reference(VbaiPatient)
+* type = $SCT#308335008 "Patient encounter procedure"
diff --git a/input/fsh/SD_VbaiImagingMedia.fsh b/input/fsh/SD_VbaiImagingMedia.fsh
@@ -0,0 +1,9 @@
+Profile:        VbaiImagingMedia
+Parent:         Media
+Id:             vbai-imaging-media
+Title:          "VBAI Imaging Media"
+Description:    "A imaging media profile based on the base Media resource."
+* subject only Reference(VbaiPatient)
+* encounter only Reference(VbaiEncounter)
+* modality 1..1
+* content 1..1
diff --git a/input/fsh/SD_VbaiImagingStudy.fsh b/input/fsh/SD_VbaiImagingStudy.fsh
@@ -0,0 +1,8 @@
+Profile:        VbaiImagingStudy
+Parent:         ImagingStudy
+Id:             vbai-imaging-study
+Title:          "VBAI Imaging Study"
+Description:    "An imaging study profile based on the base ImagingStudy resource."
+* subject only Reference(VbaiPatient)
+* encounter only Reference(VbaiEncounter)
+* modality 1..1
diff --git a/input/fsh/SD_VbaiPatient.fsh b/input/fsh/SD_VbaiPatient.fsh
@@ -0,0 +1,6 @@
+Profile:        VbaiPatient
+Parent:         us-core-patient
+Id:             vbai-patient
+Title:          "VBAI Patient"
+Description:    "A patient profile based on US Core Patient"
+* birthDate 1..1
diff --git a/input/fsh/SD_VbaiPlanDefinition.fsh b/input/fsh/SD_VbaiPlanDefinition.fsh
@@ -0,0 +1,10 @@
+Profile: VbaiPlanDefinition
+Parent: PlanDefinition
+Id: vbai-plan-definition
+Title: "Vbai Plan Definition"
+Description: "An PlanDefinition profile based on the base PlanDefinition resource."
+* status 1..1 MS
+* title 1..1 MS
+* date 1..1 MS
+* action 0..* MS
+* action.action 0..* MS
diff --git a/input/fsh/SD_VbaiQuestionnaire.fsh b/input/fsh/SD_VbaiQuestionnaire.fsh
@@ -0,0 +1,12 @@
+Profile:        VbaiQuestionnaire
+Parent:         Questionnaire
+Id:             vbai-questionnaire
+Title:          "VBAI Questionnaire"
+Description:    "A questionnaire profile based on the base Questionnaire resource"
+
+* title 1..1 MS
+* date 0..1 MS
+* item 1..* MS
+* item.linkId 1..1 MS
+* item.item 0..* MS
+* status 1..1 MS
diff --git a/input/fsh/SD_VbaiQuestionnaireResponse.fsh b/input/fsh/SD_VbaiQuestionnaireResponse.fsh
@@ -0,0 +1,10 @@
+Profile:        VbaiQuestionnaireResponse
+Parent:         QuestionnaireResponse
+Id:             vbai-questionnaire-response
+Title:          "VBAI Questionnaire Response"
+Description:    "A questionnaire response profile based on the base QuestionnaireResponse resource"
+* questionnaire 1..1 MS
+* status 1..1 MS
+
+
+
diff --git a/input/fsh/SD_VbaiVitalSigns.fsh b/input/fsh/SD_VbaiVitalSigns.fsh
@@ -0,0 +1,8 @@
+Profile:        VbaiVitalSigns
+Parent:         us-core-vital-signs
+Id:             vbai-vital-signs
+Title:          "VBAI Vital Signs"
+Description:    "A observation profile based on US Core Vital Signs Profile."
+* subject only Reference(VbaiPatient)
+* encounter only Reference(VbaiEncounter)
+* code 1..1
diff --git a/input/fsh/SD_VbaiWaveformDevice.fsh b/input/fsh/SD_VbaiWaveformDevice.fsh
@@ -0,0 +1,6 @@
+Profile:        VbaiWaveformDevice
+Parent:         Device
+Id:             vbai-waveform-device
+Title:          "VBAI Waveform Device"
+Description:    "A device profile based on the base Device resource."
+* deviceName 1..1
diff --git a/input/fsh/SD_VbaiWaveformMedia.fsh b/input/fsh/SD_VbaiWaveformMedia.fsh
@@ -0,0 +1,8 @@
+Profile:        VbaiWaveformMedia
+Parent:         Media
+Id:             vbai-waveform-media
+Title:          "VBAI Waveform Media"
+Description:    "A media profile based on the base Media resource. Primarily captures binary audio waveform data."
+* subject only Reference(VbaiPatient)
+* encounter only Reference(VbaiEncounter)
+* modality 1..1