Merge pull request #143 from kind-lab/deploy_evan

Deploy evan
kind-lab · Mar 25, 2024 · 9297a8c · 9297a8c
2 parents 00c538c + 6de5cd8
commit 9297a8c
Show file tree

Hide file tree

Showing 66 changed files with 6 additions and 8,680 deletions.
diff --git a/.github/workflows/deploy.yml b/.github/workflows/deploy.yml
@@ -10,10 +10,7 @@ jobs:
       fail-fast: false
     steps:
       - uses: actions/checkout@v3
-        with:
-          fetch-depth: 1
-          ref: ${{ github.event.pull_request.head.ref }}
-
+
       - uses: actions/setup-java@v3
         with:
           distribution: "temurin"
@@ -96,10 +93,14 @@ jobs:
           git config --global user.email "github-actions[bot]@users.noreply.github.com"
           git config --global user.name "github-actions[bot]"
           git config --global credential.helper cache
-          git branch
+          git clone --depth 1 https://${{ secrets.GH_VBAI_PAT }}@github.com/kind-lab/voice-biomarker-fhir tmp_branch
+          rm -r tmp_branch/input/fsh
+          cp -r ./input/fsh tmp_branch/input/
+          cd tmp_branch
           git add ./input/fsh
           git commit -a -m "$(date): update redcap2fhir resources"
           git push
+          cd ..
 
 
 

diff --git a/input/fsh/fsh/AL_CodeSystem.fsh b/input/fsh/fsh/AL_CodeSystem.fsh
diff --git a/input/fsh/fsh/SD_VbaiBodyHeight.fsh b/input/fsh/fsh/SD_VbaiBodyHeight.fsh
diff --git a/input/fsh/fsh/SD_VbaiBodyWeight.fsh b/input/fsh/fsh/SD_VbaiBodyWeight.fsh
diff --git a/input/fsh/fsh/SD_VbaiCohortProtocol.fsh b/input/fsh/fsh/SD_VbaiCohortProtocol.fsh
diff --git a/input/fsh/fsh/SD_VbaiCondition.fsh b/input/fsh/fsh/SD_VbaiCondition.fsh
diff --git a/input/fsh/fsh/SD_VbaiConsent.fsh b/input/fsh/fsh/SD_VbaiConsent.fsh
diff --git a/input/fsh/fsh/SD_VbaiEncounter.fsh b/input/fsh/fsh/SD_VbaiEncounter.fsh
diff --git a/input/fsh/fsh/SD_VbaiImagingMedia.fsh b/input/fsh/fsh/SD_VbaiImagingMedia.fsh
diff --git a/input/fsh/fsh/SD_VbaiImagingStudy.fsh b/input/fsh/fsh/SD_VbaiImagingStudy.fsh
diff --git a/input/fsh/fsh/SD_VbaiPatient.fsh b/input/fsh/fsh/SD_VbaiPatient.fsh
diff --git a/input/fsh/fsh/SD_VbaiPlanDefinition.fsh b/input/fsh/fsh/SD_VbaiPlanDefinition.fsh
diff --git a/input/fsh/fsh/SD_VbaiQuestionnaire.fsh b/input/fsh/fsh/SD_VbaiQuestionnaire.fsh
diff --git a/input/fsh/fsh/SD_VbaiQuestionnaireResponse.fsh b/input/fsh/fsh/SD_VbaiQuestionnaireResponse.fsh
diff --git a/input/fsh/fsh/SD_VbaiVitalSigns.fsh b/input/fsh/fsh/SD_VbaiVitalSigns.fsh
diff --git a/input/fsh/fsh/SD_VbaiWaveformDevice.fsh b/input/fsh/fsh/SD_VbaiWaveformDevice.fsh
diff --git a/input/fsh/fsh/SD_VbaiWaveformMedia.fsh b/input/fsh/fsh/SD_VbaiWaveformMedia.fsh
diff --git a/input/fsh/fsh/acousticTasks/mood/acousticTasksMood.fsh b/input/fsh/fsh/acousticTasks/mood/acousticTasksMood.fsh
diff --git a/input/fsh/fsh/acousticTasks/peds/acousticTasksPeds.fsh b/input/fsh/fsh/acousticTasks/peds/acousticTasksPeds.fsh
diff --git a/input/fsh/fsh/acousticTasks/respiratory/acousticTasksRespiratory.fsh b/input/fsh/fsh/acousticTasks/respiratory/acousticTasksRespiratory.fsh
diff --git a/input/fsh/fsh/acousticTasks/voice/acousticTasksVoice.fsh b/input/fsh/fsh/acousticTasks/voice/acousticTasksVoice.fsh