Updated Deploy yml #80
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| name: Build the IG | |
| on: [pull_request] | |
| jobs: | |
| validate: | |
| runs-on: ubuntu-latest | |
| strategy: | |
| fail-fast: false | |
| steps: | |
| - uses: actions/checkout@v3 | |
| - uses: actions/setup-java@v3 | |
| with: | |
| distribution: "temurin" | |
| java-version: "17" | |
| - uses: actions/checkout@v4 | |
| - uses: actions/setup-python@v5 | |
| with: | |
| python-version: '3.10' | |
| # Install ruby | |
| # https://github.com/ruby/setup-ruby | |
| - uses: ruby/setup-ruby@v1 | |
| with: | |
| ruby-version: "3.2" | |
| # Install Jekyll | |
| # https://jekyllrb.com/docs/installation/ubuntu/ | |
| - name: "Install Jekyll" | |
| shell: bash | |
| run: | | |
| gem install jekyll bundler | |
| jekyll -v | |
| # Install node if SUSHI is needed | |
| # https://github.com/actions/setup-node | |
| - name: "Install Node.js" | |
| uses: actions/setup-node@v3 | |
| with: | |
| node-version: "18" | |
| # Install SUSHI if needed | |
| - name: "Install SUSHI" | |
| shell: bash | |
| run: | | |
| npm install -g [email protected] | |
| sushi --version | |
| sushi . | |
| # Install GOFSH if needed | |
| - name: "Install GOFSH" | |
| shell: bash | |
| run: | | |
| npm install -g [email protected] | |
| gofsh --version | |
| # Install reproschema2fhir if needed | |
| - name: Checkout | |
| uses: actions/checkout@v4 | |
| with: | |
| repository: kind-lab/reproschema-to-fhir | |
| submodules: 'true' | |
| path: './tofsh' | |
| ssh-key: ${{ secrets.SSH_DEPLOY_KEY }} | |
| # Call Gofsh if needed | |
| - name: Checkout | |
| shell: bash | |
| run: | | |
| cd ./tofsh | |
| pip install -e . | |
| touch .env | |
| git submodule update --init --recursive | |
| echo -e "CODESYSTEM_URI = https://voicecollab.ai/fhir/CodeSystem/" >> .env | |
| echo -e "VALUESET_URI = https://voicecollab.ai/fhir/ValueSet/" >> .env | |
| echo -e "QUESTIONNAIRE_URI = https://voicecollab.ai/fhir/Questionnaire/" >> .env | |
| echo -e "QUESTIONNAIRE_LANGUAGE = en" >> .env | |
| echo -e "FHIR_QUESTIONNAIRE_MODE = AnswerOptions" >> .env | |
| ./job.sh | |
| cd .. | |
| cp -r ./tofsh/output/ fsh_files | |
| gofsh fsh_files | |
| rm -r ./input/fsh | |
| cp -r gofsh/input/fsh ./input/fsh | |
| sushi . | |
| - name: "Download the IG Publisher" | |
| shell: bash | |
| run: | | |
| mkdir ./input-cache | |
| curl -sS -L https://github.com/HL7/fhir-ig-publisher/releases/latest/download/publisher.jar -o ./input-cache/publisher.jar | |
| chmod +x ./input-cache/publisher.jar | |
| - name: "Create IG" | |
| shell: bash | |
| run: | | |
| java -jar -Xms4096M -Xmx6144M -XX:NewRatio=1 -XX:-UseAdaptiveSizePolicy input-cache/publisher.jar ig.ini |