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Re-release 0.3.2 for zenodo.

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@kblin kblin released this 28 Jul 12:24
· 13 commits to master since this release

This is a re-release 0.3.2 of ncbi-genome-download, to get a Zenodo DOI generated. It's functionally identical to the existing 0.3.2 release.

Major changes of this release are:

  • Add support for the new format assembly info headers, fixing downloads.
  • Support for the translated-cds format (thanks @SwiftSeal)
  • Allow fuzzy searches for accessions
  • Cache the MD5SUMS files for a day as well, to make re-starting the
    download easier.

Detailed changes:

Kai Blin (9):
      core: Actually expose the --fuzzy-accessions logic built back in 2019 on the command line
      core: Improve the --refseq-categories tooltip
      core: Only re-download MD5SUMS if they're more than a day old
      core: Show progress bar both for downloading MD5SUMS and data files
      chore: update the python versions for the CI workflow
      chore: Remove old drone CI integration
      chore: Reformat README.md to fix markdownlint errors
      summary: Support the new format summary files
      Bump version to 0.3.2

Moray Smith (1):
      Update config.py