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This is release 0.2.3 of ncbi-genome-download.

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@kblin kblin released this 08 Feb 15:46
· 214 commits to master since this release
0.2.3

This is release 0.2.3 of ncbi-genome-download.

Highlights of this version include:

  • Properly deal with existing human-readable symlinks when re-running a download, thanks to An Phung (@anphung).
  • Support creating human-readable symlinks without reloading the genome data
  • Work around formatting issues in NCBI's viral assembly_summary.txt files

Detailed changes:

An Phung (1):
      core: Check symlink existence, fix #20

Kai Blin (6):
      create_readable_dir: Special case viral entries, because they are special snowflakes
      core: Make sure invalid checksum lines are skipped.
      core: Allow creating human-readable links for already downloaded files
      summary: Skip invalid assembly_summary.txt lines
      summary: Try to fix invalid viral assembly_summary.txt lines instead of skipping them
      Bump version to 0.2.3