ENH: add in ability to load AIM XML files from the Load Data panel. T…

…odo: write a report node storage node so can save from the application

qSlicerReportingIO.cxx

@@ -0,0 +1,161 @@
+/*==============================================================================
+
+  Program: 3D Slicer
+
+  Copyright (c) Kitware Inc.
+
+  See COPYRIGHT.txt
+  or http://www.slicer.org/copyright/copyright.txt for details.
+
+  Unless required by applicable law or agreed to in writing, software
+  distributed under the License is distributed on an "AS IS" BASIS,
+  WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+  See the License for the specific language governing permissions and
+  limitations under the License.
+
+  This file was originally developed by Julien Finet, Kitware Inc.
+  and was partially funded by NIH grant 3P41RR013218-12S1
+
+==============================================================================*/
+
+// Qt includes
+#include <QFileInfo>
+
+// PythonQt includes
+#include <PythonQt.h>
+
+// SlicerQt includes
+#include "qSlicerApplication.h"
+#include "qSlicerPythonManager.h"
+#include "qSlicerReportingIO.h"
+
+//#include "qSlicerReportingIOOptionsWidget.h"
+
+// Logic includes
+#include <vtkSlicerApplicationLogic.h>
+#include "vtkSlicerReportingModuleLogic.h"
+
+// MRML includes
+#include <vtkMRMLNode.h>
+#include <vtkMRMLColorNode.h>
+#include <vtkMRMLReportingReportNode.h>
+// VTK includes
+#include <vtkNew.h>
+#include <vtkSmartPointer.h>
+
+//-----------------------------------------------------------------------------
+class qSlicerReportingIOPrivate
+{
+  public:
+  vtkSmartPointer<vtkSlicerReportingModuleLogic> ReportingLogic;
+};
+
+
+//-----------------------------------------------------------------------------
+/// \ingroup Slicer_QtModules_Reporting
+//-----------------------------------------------------------------------------
+qSlicerReportingIO::qSlicerReportingIO(QObject* _parent)
+  : Superclass(_parent)
+  , d_ptr(new qSlicerReportingIOPrivate)
+{
+}
+
+qSlicerReportingIO::qSlicerReportingIO(vtkSlicerReportingModuleLogic* logic, QObject* _parent)
+  : Superclass(_parent)
+  , d_ptr(new qSlicerReportingIOPrivate)
+{
+  this->setReportingLogic(logic);
+}
+
+//-----------------------------------------------------------------------------
+qSlicerReportingIO::~qSlicerReportingIO()
+{
+}
+
+//-----------------------------------------------------------------------------
+void qSlicerReportingIO::setReportingLogic(vtkSlicerReportingModuleLogic* logic)
+{
+  Q_D(qSlicerReportingIO);
+  d->ReportingLogic = logic;
+}
+
+//-----------------------------------------------------------------------------
+vtkSlicerReportingModuleLogic* qSlicerReportingIO::reportingLogic()const
+{
+  Q_D(const qSlicerReportingIO);
+  return d->ReportingLogic.GetPointer();
+}
+
+//-----------------------------------------------------------------------------
+QString qSlicerReportingIO::description()const
+{
+  return "Reporting";
+}
+
+//-----------------------------------------------------------------------------
+qSlicerIO::IOFileType qSlicerReportingIO::fileType()const
+{
+    return QString("AIMXML");
+}
+
+//-----------------------------------------------------------------------------
+QStringList qSlicerReportingIO::extensions()const
+{
+  return QStringList()
+    << "Reporting (*.xml)";
+}
+
+//-----------------------------------------------------------------------------
+qSlicerIOOptions* qSlicerReportingIO::options()const
+{
+  return 0;
+}
+
+//-----------------------------------------------------------------------------
+bool qSlicerReportingIO::load(const IOProperties& properties)
+{
+  Q_D(qSlicerReportingIO);
+  Q_ASSERT(properties.contains("fileName"));
+  QString fileName = properties["fileName"].toString();
+
+  QString name = QFileInfo(fileName).baseName();
+  if (properties.contains("name"))
+    {
+    name = properties["name"].toString();
+    }
+
+  if (d->ReportingLogic.GetPointer() == 0)
+    {
+    return false;
+    }
+
+  // make a new report node
+  vtkMRMLReportingReportNode *reportNode = vtkMRMLReportingReportNode::New();
+  // get the default colour node id
+  const char * colorNodeID =  d->ReportingLogic->GetDefaultColorNode()->GetID();
+  reportNode->SetColorNodeID(colorNodeID);
+  this->mrmlScene()->AddNode(reportNode);
+
+
+  qSlicerPythonManager* pythonManager = qSlicerApplication::application()->pythonManager();
+  QVariant retvar = pythonManager->executeString(QString("from SlicerReportingModuleWidgetHelper import SlicerReportingModuleWidgetHelper as ReportingHelper"));
+  QString loadFileString = QString("ReportingHelper().LoadAIMFile(\"") + QString(reportNode->GetID()) + QString("\",\"") + QString(fileName) + QString("\")");
+  qDebug() << loadFileString;
+  retvar = pythonManager->executeString(loadFileString);
+
+  char * nodeID = reportNode->GetID();
+
+  if (!nodeID)
+    {
+    this->setLoadedNodes(QStringList());
+    return false;
+    }
+  this->setLoadedNodes( QStringList(QString(nodeID)) );
+  if (properties.contains("name"))
+    {
+    std::string uname = this->mrmlScene()->GetUniqueNameByString(
+      properties["name"].toString().toLatin1());
+    this->mrmlScene()->GetNodeByID(nodeID)->SetName(uname.c_str());
+    }
+  return true;
+}

qSlicerReportingIO.h

@@ -0,0 +1,60 @@
+/*==============================================================================
+
+  Program: 3D Slicer
+
+  Copyright (c) Kitware Inc.
+
+  See COPYRIGHT.txt
+  or http://www.slicer.org/copyright/copyright.txt for details.
+
+  Unless required by applicable law or agreed to in writing, software
+  distributed under the License is distributed on an "AS IS" BASIS,
+  WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+  See the License for the specific language governing permissions and
+  limitations under the License.
+
+  This file was originally developed by Julien Finet, Kitware Inc.
+  and was partially funded by NIH grant 3P41RR013218-12S1
+
+==============================================================================*/
+
+#ifndef __qSlicerReportingIO_h
+#define __qSlicerReportingIO_h
+
+// SlicerQt includes
+#include "qSlicerFileReader.h"
+
+class qSlicerReportingIOPrivate;
+class vtkSlicerReportingModuleLogic;
+
+//-----------------------------------------------------------------------------
+/// \ingroup Slicer_QtModules_Reporting
+class qSlicerReportingIO
+  : public qSlicerFileReader
+{
+  Q_OBJECT
+public:
+  typedef qSlicerFileReader Superclass;
+  qSlicerReportingIO(QObject* parent = 0);
+  qSlicerReportingIO(vtkSlicerReportingModuleLogic* logic, QObject* parent = 0);
+  virtual ~qSlicerReportingIO();
+
+  vtkSlicerReportingModuleLogic* reportingLogic()const;
+  void setReportingLogic(vtkSlicerReportingModuleLogic* logic);
+
+  virtual QString description()const;
+  virtual IOFileType fileType()const;
+  virtual QStringList extensions()const;
+  virtual qSlicerIOOptions* options()const;
+
+  virtual bool load(const IOProperties& properties);
+protected:
+  QScopedPointer<qSlicerReportingIOPrivate> d_ptr;
+
+private:
+  Q_DECLARE_PRIVATE(qSlicerReportingIO);
+  Q_DISABLE_COPY(qSlicerReportingIO);
+
+};
+
+#endif