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ENGR230 NGS project. Binning algorithm for metagenomic data

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engr230_ngs

ENGR230 NGS project. Binning algorithm for metagenomic data

Directories:

Binner - The code for the library. This is python code that is not intended
        to be run from the command line.
scripts - Directory with command line scripts. This scripts are intended
          to be run from the command line.
test - directory with the tests
    data - All the files required for the tests are in here.

To run the tests: python run_tests.py --log logfile The argument --log is optional

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ENGR230 NGS project. Binning algorithm for metagenomic data

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  • Python 100.0%