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๐ŸŽฎ A collaborative repository for sharing and accelerating our team's common codebase (especially single-cell) ๐Ÿ‘พ

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CodeShareHub

1. EnrichmentPlot (Completed)

  • Input file์„ ๋„ฃ์—ˆ์„ ๋•Œ output์œผ๋กœ enrichment result file, table, multipanel figure๊นŒ์ง€ ์™„์„ฑ๋˜๋„๋ก ์ฝ”๋“œ ๋‹จ์ˆœํ™”.
    • table์€ xlsx๋กœ ์ €์žฅํ•˜๊ณ , figure ๋งŒ๋“ค์—ˆ์„ ๋•Œ axis text๊ฐ€ ํ•˜๋‚˜์˜ text๋กœ ์—ฐ๊ฒฐ๋˜๋„๋ก ์˜ต์…˜์„ ์„ค์ •.
    • ORA, GSEA ํ…Œ์ŠคํŠธ ๋ฐฉ์‹ ๋ฐ GO, Reactome, KEGG ๋“ฑ ์—ฌ๋Ÿฌ ๋ฐ์ดํ„ฐ๋ฒ ์ด์Šค์˜ ๋ถ„์„ ๊ฒฐ๊ณผ๊ฐ€ treeplot, barplot, dotplot ํ˜•์‹์œผ๋กœ ํ•˜๋‚˜์˜ multipanel figure๋กœ ๊ตฌ์„ฑ๋˜๋„๋ก ๋งŒ๋“œ๋Š” ๊ฒƒ์ด ๋ชฉ์ .

2. SingleCell (Ongoing)

  • ์‹ฑ๊ธ€์…€ ๋ถ„์„์—์„œ ๋ฐ˜๋ณต์ ์œผ๋กœ ์“ฐ์ด๋Š” ์ฝ”๋“œ๋“ค์„ ๋‹จ์ˆœํ™”ํ•˜๊ณ  ๊ณต์œ  ๊ฐ€๋Šฅํ•œ ์ฝ”๋“œ๋กœ ์ •๋ฆฌํ•˜๊ธฐ.

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๐ŸŽฎ A collaborative repository for sharing and accelerating our team's common codebase (especially single-cell) ๐Ÿ‘พ

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