Parallel Chunkwise Writing #20
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… working due to event logging in pre-processing
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Chunkwise writing of anndata can be done in parallel now utilising multiple workers. Gets a roughly 40% increment in disk writing speeds without increasing memory constraint.
Change:
scalr/utils/file_utils/write_chunkwise_data: created a sub-function to transform and write a chunk, this sub function is then called by multiple workersNote: EventLogger in preprocessing stage is no longer available due to not being parallelizable.