Confirm support for Python 3.13 and drop 3.8 #2489
Workflow file for this run
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| name: Test | ||
| on: | ||
| pull_request: | ||
| branches: [ main , "migrate**"] | ||
| schedule: | ||
| # 05:00 UTC = 06:00 CET = 07:00 CEST | ||
| - cron: "0 5 * * *" | ||
| # Cancel previous runs that have not completed | ||
| concurrency: | ||
| group: ${{ github.workflow }}-${{ github.head_ref || github.run_id }} | ||
| cancel-in-progress: true | ||
| jobs: | ||
| warm-lfs-cache: | ||
| strategy: | ||
| matrix: | ||
| os: [ macos-13, macos-latest, ubuntu-latest, windows-latest ] | ||
| runs-on: ${{ matrix.os }} | ||
| steps: | ||
| - uses: nschloe/action-cached-lfs-checkout@v1 | ||
| pytest: | ||
| needs: warm-lfs-cache | ||
| strategy: | ||
| matrix: | ||
| os: | ||
| - macos-13 | ||
| - macos-latest | ||
| - ubuntu-latest | ||
| - windows-latest | ||
| upstream: | ||
| # In each group: | ||
| # - Versions of ixmp and message_ix to test. | ||
| # - Latest supported Python version for those or other dependencies. | ||
| # - Extra dependencies, in particular fixed/maximum versions to resolve conficts. | ||
| # - dask[dataframe] >= 2024.3.0 requires dask-expr and in turn pandas >= 2.0. | ||
| # https://github.com/iiasa/message-ix-models/pull/156#issuecomment-2020152360 | ||
| # - genno: upstream versions < 3.8.0 import genno.computations, removed in 1.25.0. | ||
| # https://github.com/iiasa/message-ix-models/pull/156 | ||
| # - pytest: upstream versions < 3.9.0 use a hook argument removed in pytest 8.1.0. | ||
| # https://github.com/iiasa/message-ix-models/pull/155 | ||
| # | ||
| # Minimum version given in pyproject.toml + earlier version of Python | ||
| - version: v3.4.0 # 2022-01-27 | ||
| python-version: "3.11" | ||
| extra-deps: '"dask < 2024.3.0" "genno < 1.25" "pandas < 2.0" "pytest == 8.0.0"' | ||
| dask-dataframe: false | ||
| - version: v3.5.0 # 2022-05-06 | ||
| python-version: "3.11" | ||
| extra-deps: '"dask < 2024.3.0" "genno < 1.25" "pandas < 2.0" "pytest == 8.0.0"' | ||
| dask-dataframe: false | ||
| - version: v3.6.0 # 2022-08-18 | ||
| python-version: "3.11" | ||
| extra-deps: '"dask < 2024.3.0" "genno < 1.25" "pandas < 2.0" "pytest == 8.0.0"' | ||
| dask-dataframe: false | ||
| - version: v3.7.0 # 2023-05-17 | ||
| python-version: "3.11" | ||
| extra-deps: ' "genno < 1.25" "pytest == 8.0.0"' | ||
| dask-dataframe: true | ||
| - version: v3.8.0 # 2024-01-12 | ||
| python-version: "3.12" | ||
| extra-deps: ' "pytest == 8.0.0"' | ||
| dask-dataframe: true | ||
| # Latest released version + latest released Python | ||
| - version: v3.9.0 # 2024-06-04 | ||
| python-version: "3.13" | ||
| extra-deps: '' | ||
| dask-dataframe: true | ||
| # Development version + latest released Python | ||
| - version: main | ||
| python-version: "3.13" | ||
| extra-deps: '' | ||
| dask-dataframe: true | ||
| exclude: | ||
| # Specific version combinations that are invalid / not to be used | ||
| # These versions of ixmp are not able locate the arm64 GAMS API binaries | ||
| - { os: macos-latest, upstream.version: v3.4.0 } | ||
|
Check failure on line 81 in .github/workflows/pytest.yaml
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| - { os: macos-latest, upstream.version: v3.5.0 } | ||
| - { os: macos-latest, upstream.version: v3.6.0 } | ||
| - { os: macos-latest, upstream.version: v3.7.0 } | ||
| - { os: macos-latest, upstream.version: v3.8.0 } | ||
| - { os: macos-latest, upstream.version: v3.9.0 } | ||
| # Redundant with macos-latest | ||
| - { os: macos-13, upstream.version: main } | ||
| fail-fast: false | ||
| runs-on: ${{ matrix.os }} | ||
| name: ${{ matrix.os }}-py${{ matrix.upstream.python-version }}-upstream-${{ matrix.upstream.version }} | ||
| steps: | ||
| - name: Cache test data | ||
| uses: actions/cache@v4 | ||
| with: | ||
| path: message-local-data | ||
| key: ${{ matrix.os }} | ||
| - name: Check out message-ix-models | ||
| uses: nschloe/action-cached-lfs-checkout@v1 | ||
| - uses: actions/setup-python@v5 | ||
| with: | ||
| python-version: ${{ matrix.upstream.python-version }} | ||
| cache: pip | ||
| cache-dependency-path: "**/pyproject.toml" | ||
| - uses: iiasa/actions/setup-gams@main | ||
| with: | ||
| version: 43.4.1 | ||
| license: ${{ secrets.GAMS_LICENSE }} | ||
| - uses: ts-graphviz/setup-graphviz@v2 | ||
| # TEMPORARY Work around ts-graphviz/setup-graphviz#630 | ||
| if: ${{ ! startswith(matrix.os, 'macos-') }} | ||
| - name: Install packages and dependencies | ||
| # By default, install: | ||
| # - ixmp, message_ix: from GitHub branches/tags per matrix.upstream-version (above) | ||
| # - other dependencies including genno: from PyPI. | ||
| # | ||
| # To test against unreleased code (on `main`, or other branches | ||
| # for open PRs), temporarily uncomment, add, or edit lines below | ||
| # as needed. DO NOT merge such changes to `main`. | ||
| run: | | ||
| # pip install --upgrade "genno @ git+https://github.com/khaeru/genno.git@main" | ||
| pip install --upgrade "ixmp @ git+https://github.com/iiasa/ixmp.git@${{ matrix.upstream.version }}" | ||
| pip install --upgrade "message-ix @ git+https://github.com/iiasa/message_ix.git@${{ matrix.upstream.version }}" | ||
| pip install .[docs,tests] ${{ matrix.upstream.extra-deps }} | ||
| # TEMPORARY With Python 3.13 pyam-iamc resolves to 1.3.1, which in turn | ||
| # limits pint < 0.17. Override. | ||
| pip install --upgrade pint | ||
| - name: Configure local data path | ||
| run: | | ||
| mkdir -p message-local-data/cache | ||
| mix-models config set "message local data" "$(realpath message-local-data)" | ||
| mix-models config show | ||
| shell: bash | ||
| - name: Run test suite using pytest | ||
| run: | | ||
| pytest message_ix_models \ | ||
| -m "not (ece_db or snapshot)" \ | ||
| -rA --verbose --color=yes --durations=20 \ | ||
| --cov-report=term-missing --cov-report=xml \ | ||
| --numprocesses=auto \ | ||
| --local-cache --jvmargs="-Xmx6G" | ||
| shell: bash | ||
| - name: Upload test coverage to Codecov.io | ||
| uses: codecov/codecov-action@v5 | ||
| with: | ||
| token: ${{ secrets.CODECOV_TOKEN }} # required | ||
| pre-commit: | ||
| name: Code quality | ||
| runs-on: ubuntu-latest | ||
| steps: | ||
| - uses: actions/checkout@v4 | ||
| - uses: actions/setup-python@v5 | ||
| with: { python-version: "3.13" } | ||
| - name: Force recreation of pre-commit virtual environment for mypy | ||
| if: github.event_name == 'schedule' # Comment this line to run on a PR | ||
| run: gh cache list -L 999 | cut -f2 | grep pre-commit | xargs -I{} gh cache delete "{}" || true | ||
| env: { GH_TOKEN: "${{ github.token }}" } | ||
| - uses: pre-commit/[email protected] | ||
