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Classify single sugar as a nonpolymer, not branched #352

Classify single sugar as a nonpolymer, not branched

Classify single sugar as a nonpolymer, not branched #352

Workflow file for this run

name: build
on: [push, pull_request]
jobs:
build:
strategy:
fail-fast: false
matrix:
os: [ubuntu-22.04]
python-version: ['3.8', '3.9', '3.10', '3.11', '3.12']
include:
- os: ubuntu-20.04
python-version: '3.6'
- os: macos-latest
python-version: '3.10'
env:
PY2: ${{ startsWith(matrix.python-version, 2) && 'on' || 'off' }}
runs-on: ${{ matrix.os }}
steps:
- uses: actions/checkout@v4
- name: Set up Python ${{ matrix.python-version }}
uses: actions/setup-python@v4
with:
python-version: ${{ matrix.python-version }}
- name: Install dependencies (Mac)
if: matrix.os == 'macos-latest'
run: |
brew install swig
- name: Install dependencies
run: |
python -m pip install --upgrade pip
if [ "${{ env.PY2 }}" == "on" ]; then
pip install coverage pytest-cov flake8 setuptools
else
pip install coverage pytest-cov flake8 setuptools pep8-naming
fi
- name: Test
run: |
# Test with Python tokenizer
py.test --cov=ihm --cov-branch -v .
CFLAGS="-coverage" python setup.py build_ext --inplace -t build
# Test with C tokenizer
py.test --cov=ihm --cov-branch --cov-report=xml --cov-append -v .
if [ "${{ env.PY2 }}" == "on" ]; then
flake8 --ignore E402,W503,W504 --exclude util/make-mmcif.py
else
flake8 --ignore E402,W503,W504,N816
fi
- uses: codecov/codecov-action@v1