opt in bootstrap 5 #122
Annotations
5 errors and 29 warnings
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Install dependencies pass 2
--- re-building ‘iSEEu.Rmd’ using rmarkdown
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Install dependencies pass 2
processing vignette 'iSEEu.Rmd' failed with diagnostics:
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Install dependencies pass 2
Vignette re-building failed.
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Install dependencies pass 2
Failed to install 'iSEEu' from local:
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Install dependencies pass 2
Process completed with exit code 1.
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The following actions use a deprecated Node.js version and will be forced to run on node20: actions/checkout@v3, actions/cache@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
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Install macOS system dependencies
harfbuzz 10.0.1 is already installed and up-to-date.
To reinstall 10.0.1, run:
brew reinstall harfbuzz
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Install macOS system dependencies
fribidi 1.0.16 is already installed and up-to-date.
To reinstall 1.0.16, run:
brew reinstall fribidi
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Install macOS system dependencies
macOS's Gatekeeper has been disabled for this Cask
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Install dependencies pass 2
unable to access index for repository https://bioconductor.org/packages/3.20/bioc/bin/macosx/big-sur-arm64/contrib/4.5:
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Install dependencies pass 2
unable to access index for repository https://bioconductor.org/packages/3.20/data/annotation/bin/macosx/big-sur-arm64/contrib/4.5:
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Install dependencies pass 2
unable to access index for repository https://bioconductor.org/packages/3.20/data/experiment/bin/macosx/big-sur-arm64/contrib/4.5:
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Install dependencies pass 2
unable to access index for repository https://bioconductor.org/packages/3.20/workflows/bin/macosx/big-sur-arm64/contrib/4.5:
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Install dependencies pass 2
unable to access index for repository https://bioconductor.org/packages/3.20/books/bin/macosx/big-sur-arm64/contrib/4.5:
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Install dependencies pass 2
unable to access index for repository https://cran.rstudio.com/bin/macosx/big-sur-arm64/contrib/4.5:
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Install dependencies pass 1
unable to access index for repository https://bioconductor.org/packages/3.20/bioc/bin/macosx/big-sur-arm64/contrib/4.5:
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Install dependencies pass 1
unable to access index for repository https://bioconductor.org/packages/3.20/data/annotation/bin/macosx/big-sur-arm64/contrib/4.5:
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Install dependencies pass 1
unable to access index for repository https://bioconductor.org/packages/3.20/data/experiment/bin/macosx/big-sur-arm64/contrib/4.5:
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Install dependencies pass 1
unable to access index for repository https://bioconductor.org/packages/3.20/workflows/bin/macosx/big-sur-arm64/contrib/4.5:
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Install dependencies pass 1
unable to access index for repository https://bioconductor.org/packages/3.20/books/bin/macosx/big-sur-arm64/contrib/4.5:
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Install dependencies pass 1
unable to access index for repository https://cran.rstudio.com/bin/macosx/big-sur-arm64/contrib/4.5:
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Install dependencies pass 1
unable to access index for repository https://bioconductor.org/packages/3.20/bioc/bin/macosx/big-sur-arm64/contrib/4.5:
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Install dependencies pass 1
unable to access index for repository https://bioconductor.org/packages/3.20/data/annotation/bin/macosx/big-sur-arm64/contrib/4.5:
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Install dependencies pass 1
unable to access index for repository https://bioconductor.org/packages/3.20/data/experiment/bin/macosx/big-sur-arm64/contrib/4.5:
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Install dependencies pass 1
unable to access index for repository https://bioconductor.org/packages/3.20/workflows/bin/macosx/big-sur-arm64/contrib/4.5:
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Upload check results
No files were found with the provided path: check. No artifacts will be uploaded.
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Install BiocManager
unable to access index for repository https://cran.rstudio.com/bin/macosx/big-sur-arm64/contrib/4.5:
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Set BiocVersion
unable to access index for repository https://bioconductor.org/packages/3.20/bioc/bin/macosx/big-sur-arm64/contrib/4.5:
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Set BiocVersion
unable to access index for repository https://bioconductor.org/packages/3.20/data/annotation/bin/macosx/big-sur-arm64/contrib/4.5:
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Set BiocVersion
unable to access index for repository https://bioconductor.org/packages/3.20/data/experiment/bin/macosx/big-sur-arm64/contrib/4.5:
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Set BiocVersion
unable to access index for repository https://bioconductor.org/packages/3.20/workflows/bin/macosx/big-sur-arm64/contrib/4.5:
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Set BiocVersion
unable to access index for repository https://bioconductor.org/packages/3.20/books/bin/macosx/big-sur-arm64/contrib/4.5:
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Set BiocVersion
unable to access index for repository https://cran.rstudio.com/bin/macosx/big-sur-arm64/contrib/4.5:
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Query dependencies
unable to access index for repository https://cran.rstudio.com/bin/macosx/big-sur-arm64/contrib/4.5:
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