Automated report

NOTES.md

@@ -6,8 +6,8 @@ Release Notes
 
 |Ontology|Version|
 | :---: | :---: |
-|CL|2023-06-22|
 |PCL|2023-02-27|
+|CL|2023-06-22|
 |UBERON|2023-06-27|
 
 ### ASCT+b Tables

docs/Blood/README.md

@@ -1,5 +1,5 @@
 
-ASCT+B Validation Reports for Blood (2023-07-07)
+ASCT+B Validation Reports for Blood (2023-07-13)
 ================================================
 
 Table of contents
@@ -129,7 +129,7 @@ In the case of the CT-CT relationship, for each couple of terms, we verify for _
 
 |    | row_number                                                                                                               | s          | slabel                                                | user_slabel                       | o          | olabel                | user_olabel              |   deltaIC |
 |----|--------------------------------------------------------------------------------------------------------------------------|------------|-------------------------------------------------------|-----------------------------------|------------|-----------------------|--------------------------|-----------|
-|  0 | [20](https://docs.google.com/spreadsheets/d/1wx2y8_t7NsAs8hPnr6u_N1QK8y_lC3t1G0DnD3LNUnQ/edit#gid=543201897&range=20:20) | CL:0000840 | immature conventional dendritic cell                  | transitional Dendritic Cell (tDC) | CL:0001056 | dendritic cell, human | dendritic cell (DC)      |   11.2922 |
+|  0 | [20](https://docs.google.com/spreadsheets/d/1wx2y8_t7NsAs8hPnr6u_N1QK8y_lC3t1G0DnD3LNUnQ/edit#gid=543201897&range=20:20) | CL:0000840 | immature conventional dendritic cell                  | transitional Dendritic Cell (tDC) | CL:0001056 | dendritic cell, human | dendritic cell (DC)      |   11.2867 |
 |  5 | [16](https://docs.google.com/spreadsheets/d/1wx2y8_t7NsAs8hPnr6u_N1QK8y_lC3t1G0DnD3LNUnQ/edit#gid=543201897&range=16:16) | CL:0002394 | CD141-positive myeloid dendritic cell                 | dendritic cell type 1 (DC1)       | CL:0001056 | dendritic cell, human | dendritic cell (DC)      |  nan      |
 |  7 | [17](https://docs.google.com/spreadsheets/d/1wx2y8_t7NsAs8hPnr6u_N1QK8y_lC3t1G0DnD3LNUnQ/edit#gid=543201897&range=17:17) | CL:0002399 | CD1c-positive myeloid dendritic cell                  | dendritic cell type 2 (DC2)       | CL:0001056 | dendritic cell, human | dendritic cell (DC)      |  nan      |
 |  9 | [18](https://docs.google.com/spreadsheets/d/1wx2y8_t7NsAs8hPnr6u_N1QK8y_lC3t1G0DnD3LNUnQ/edit#gid=543201897&range=18:18) | CL:0002399 | CD1c-positive myeloid dendritic cell                  | dendritic cell type 3 (DC3)       | CL:0001056 | dendritic cell, human | dendritic cell (DC)      |  nan      |

docs/Blood/graph.md

@@ -1,5 +1,5 @@
 
-ASCT+B Validation Reports for Blood (2023-07-07)
+ASCT+B Validation Reports for Blood (2023-07-13)
 ================================================
 
 # ASCT+B as Graph

docs/Blood_vasculature/README.md

@@ -1,5 +1,5 @@
 
-ASCT+B Validation Reports for Blood_vasculature (2023-07-07)
+ASCT+B Validation Reports for Blood_vasculature (2023-07-13)
 ============================================================
 
 Table of contents
@@ -27993,8 +27993,8 @@ In the case of the CT-CT relationship, for each couple of terms, we verify for _
 
 |      | s          | slabel                       | user_slabel                  | o          | olabel                        | user_olabel                   | row_number                                                                                                                      |   deltaIC |
 |------|------------|------------------------------|------------------------------|------------|-------------------------------|-------------------------------|---------------------------------------------------------------------------------------------------------------------------------|-----------|
-| 3441 | CL:0002262 | endothelial cell of sinusoid | endothelial cell of sinusoid | CL:0002144 | capillary endothelial cell    | capillary endothelial cell    | [7229](https://docs.google.com/spreadsheets/d/1LUU59_gwe7JYixOlpeLnGJZz6KzUFrXlerYiM1DFSu0/edit#gid=1958526503&range=7229:7229) |   1.02109 |
-| 3442 | CL:0002262 | endothelial cell of sinusoid | endothelial cell of sinusoid | CL:0002144 | capillary endothelial cell    | capillary endothelial cell    | [7400](https://docs.google.com/spreadsheets/d/1LUU59_gwe7JYixOlpeLnGJZz6KzUFrXlerYiM1DFSu0/edit#gid=1958526503&range=7400:7400) |   1.02109 |
+| 3441 | CL:0002262 | endothelial cell of sinusoid | endothelial cell of sinusoid | CL:0002144 | capillary endothelial cell    | capillary endothelial cell    | [7400](https://docs.google.com/spreadsheets/d/1LUU59_gwe7JYixOlpeLnGJZz6KzUFrXlerYiM1DFSu0/edit#gid=1958526503&range=7400:7400) |   1.02059 |
+| 3442 | CL:0002262 | endothelial cell of sinusoid | endothelial cell of sinusoid | CL:0002144 | capillary endothelial cell    | capillary endothelial cell    | [7229](https://docs.google.com/spreadsheets/d/1LUU59_gwe7JYixOlpeLnGJZz6KzUFrXlerYiM1DFSu0/edit#gid=1958526503&range=7229:7229) |   1.02059 |
 | 3483 | CL:1000414 | endothelial cell of venule   | endothelial cell of venule   | CL:0000071 | blood vessel endothelial cell | blood vessel endothelial cell | [42](https://docs.google.com/spreadsheets/d/1LUU59_gwe7JYixOlpeLnGJZz6KzUFrXlerYiM1DFSu0/edit#gid=1958526503&range=42:42)       | nan       |
 | 3744 | CL:1000414 | endothelial cell of venule   | endothelial cell of venule   | CL:0000071 | blood vessel endothelial cell | blood vessel endothelial cell | [7234](https://docs.google.com/spreadsheets/d/1LUU59_gwe7JYixOlpeLnGJZz6KzUFrXlerYiM1DFSu0/edit#gid=1958526503&range=7234:7234) | nan       |
 | 3750 | CL:1000414 | endothelial cell of venule   | endothelial cell of venule   | CL:0000071 | blood vessel endothelial cell | blood vessel endothelial cell | [7379](https://docs.google.com/spreadsheets/d/1LUU59_gwe7JYixOlpeLnGJZz6KzUFrXlerYiM1DFSu0/edit#gid=1958526503&range=7379:7379) | nan       |

docs/Blood_vasculature/graph.md

@@ -1,5 +1,5 @@
 
-ASCT+B Validation Reports for Blood_vasculature (2023-07-07)
+ASCT+B Validation Reports for Blood_vasculature (2023-07-13)
 ============================================================
 
 # ASCT+B as Graph

docs/Blood_vasculature/report_images_Blood_vasculature.tsv

@@ -10,8 +10,8 @@ UBERON:0001138	http://upload.wikimedia.org/wikipedia/commons/3/33/Gray591.png
 UBERON:0001139	https://upload.wikimedia.org/wikipedia/commons/6/65/Iliac_veins.gif
 UBERON:0001140	http://upload.wikimedia.org/wikipedia/commons/7/76/Gray1122.png
 UBERON:0001142	http://upload.wikimedia.org/wikipedia/commons/7/76/Gray1122.png
-UBERON:0001182	http://upload.wikimedia.org/wikipedia/commons/6/68/Gray1099.png
 UBERON:0001182	http://upload.wikimedia.org/wikipedia/commons/c/c0/Superior_mesenteric_a.gif
+UBERON:0001182	http://upload.wikimedia.org/wikipedia/commons/6/68/Gray1099.png
 UBERON:0001183	http://upload.wikimedia.org/wikipedia/commons/e/e4/Gray538.png
 UBERON:0001184	http://upload.wikimedia.org/wikipedia/commons/d/da/Gray1120.png
 UBERON:0001185	http://upload.wikimedia.org/wikipedia/commons/d/da/Gray1120.png
@@ -117,8 +117,8 @@ UBERON:0001641	https://upload.wikimedia.org/wikipedia/commons/b/bd/Gray488_blue.
 UBERON:0001642	https://upload.wikimedia.org/wikipedia/commons/b/bd/Gray488_blue.gif
 UBERON:0001651	https://upload.wikimedia.org/wikipedia/commons/d/db/Alveoli_diagram.png
 UBERON:0001651	http://upload.wikimedia.org/wikipedia/commons/f/f6/Gray504.png
-UBERON:0001652	https://upload.wikimedia.org/wikipedia/commons/d/db/Alveoli_diagram.png
 UBERON:0001652	http://upload.wikimedia.org/wikipedia/commons/f/f6/Gray504.png
+UBERON:0001652	https://upload.wikimedia.org/wikipedia/commons/d/db/Alveoli_diagram.png
 UBERON:0001653	http://upload.wikimedia.org/wikipedia/commons/8/8c/Gray557.png
 UBERON:0001654	http://upload.wikimedia.org/wikipedia/commons/8/8c/Gray557.png
 UBERON:0001656	http://upload.wikimedia.org/wikipedia/commons/8/8c/Gray557.png

docs/Bone-Marrow/README.md

@@ -1,5 +1,5 @@
 
-ASCT+B Validation Reports for Bone-Marrow (2023-07-07)
+ASCT+B Validation Reports for Bone-Marrow (2023-07-13)
 ======================================================
 
 Table of contents
@@ -137,10 +137,10 @@ In the case of the CT-CT relationship, for each couple of terms, we verify for _
 
 |    | row_number                                                                                                               | s          | slabel                                                | user_slabel                       | o          | olabel                                    | user_olabel                                            |    deltaIC |
 |----|--------------------------------------------------------------------------------------------------------------------------|------------|-------------------------------------------------------|-----------------------------------|------------|-------------------------------------------|--------------------------------------------------------|------------|
-|  0 | [19](https://docs.google.com/spreadsheets/d/1prDIvvQF0akXKCfLv6FqjtQgZ_oKbIfSfMZt9twrfd0/edit#gid=771476671&range=19:19) | CL:0000990 | conventional dendritic cell                           | dendritic cell type 1 (DC1)       | CL:0001056 | dendritic cell, human                     | dendritic cell (DC)                                    |  22.9049   |
-|  1 | [20](https://docs.google.com/spreadsheets/d/1prDIvvQF0akXKCfLv6FqjtQgZ_oKbIfSfMZt9twrfd0/edit#gid=771476671&range=20:20) | CL:0000990 | conventional dendritic cell                           | dendritic cell type 2 (DC2)       | CL:0001056 | dendritic cell, human                     | dendritic cell (DC)                                    |  22.9049   |
-|  2 | [23](https://docs.google.com/spreadsheets/d/1prDIvvQF0akXKCfLv6FqjtQgZ_oKbIfSfMZt9twrfd0/edit#gid=771476671&range=23:23) | CL:0000840 | immature conventional dendritic cell                  | transitional Dendritic Cell (tDC) | CL:0001056 | dendritic cell, human                     | dendritic cell (DC)                                    |  11.2922   |
-|  8 | [33](https://docs.google.com/spreadsheets/d/1prDIvvQF0akXKCfLv6FqjtQgZ_oKbIfSfMZt9twrfd0/edit#gid=771476671&range=33:33) | CL:0000037 | hematopoietic stem cell                               | hemopoietic stem cell (HSC)       | CL:0000837 | hematopoietic multipotent progenitor cell | hemopoietic stem cell/multipotent progenitor (HSC/MPP) |   0.554574 |
+|  0 | [19](https://docs.google.com/spreadsheets/d/1prDIvvQF0akXKCfLv6FqjtQgZ_oKbIfSfMZt9twrfd0/edit#gid=771476671&range=19:19) | CL:0000990 | conventional dendritic cell                           | dendritic cell type 1 (DC1)       | CL:0001056 | dendritic cell, human                     | dendritic cell (DC)                                    |  22.8938   |
+|  1 | [20](https://docs.google.com/spreadsheets/d/1prDIvvQF0akXKCfLv6FqjtQgZ_oKbIfSfMZt9twrfd0/edit#gid=771476671&range=20:20) | CL:0000990 | conventional dendritic cell                           | dendritic cell type 2 (DC2)       | CL:0001056 | dendritic cell, human                     | dendritic cell (DC)                                    |  22.8938   |
+|  2 | [23](https://docs.google.com/spreadsheets/d/1prDIvvQF0akXKCfLv6FqjtQgZ_oKbIfSfMZt9twrfd0/edit#gid=771476671&range=23:23) | CL:0000840 | immature conventional dendritic cell                  | transitional Dendritic Cell (tDC) | CL:0001056 | dendritic cell, human                     | dendritic cell (DC)                                    |  11.2867   |
+|  8 | [33](https://docs.google.com/spreadsheets/d/1prDIvvQF0akXKCfLv6FqjtQgZ_oKbIfSfMZt9twrfd0/edit#gid=771476671&range=33:33) | CL:0000037 | hematopoietic stem cell                               | hemopoietic stem cell (HSC)       | CL:0000837 | hematopoietic multipotent progenitor cell | hemopoietic stem cell/multipotent progenitor (HSC/MPP) |   0.558503 |
 | 14 | [17](https://docs.google.com/spreadsheets/d/1prDIvvQF0akXKCfLv6FqjtQgZ_oKbIfSfMZt9twrfd0/edit#gid=771476671&range=17:17) | CL:0000826 | pro-B cell                                            | pro B progenitor                  | CL:0000945 | lymphocyte of B lineage                   | B lineage                                              | nan        |
 | 19 | [21](https://docs.google.com/spreadsheets/d/1prDIvvQF0akXKCfLv6FqjtQgZ_oKbIfSfMZt9twrfd0/edit#gid=771476671&range=21:21) | CL:0001056 | dendritic cell, human                                 | dendritic cell type 3 (DC3)       | CL:0001056 | dendritic cell, human                     | dendritic cell (DC)                                    | nan        |
 | 23 | [24](https://docs.google.com/spreadsheets/d/1prDIvvQF0akXKCfLv6FqjtQgZ_oKbIfSfMZt9twrfd0/edit#gid=771476671&range=24:24) | CL:0000764 | erythroid lineage cell                                | early erythroid                   | CL:0000764 | erythroid lineage cell                    | erythroid                                              | nan        |

docs/Bone-Marrow/graph.md

@@ -1,5 +1,5 @@
 
-ASCT+B Validation Reports for Bone-Marrow (2023-07-07)
+ASCT+B Validation Reports for Bone-Marrow (2023-07-13)
 ======================================================
 
 # ASCT+B as Graph