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2 changes: 1 addition & 1 deletion NOTES.md
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|Ontology|Version|
| :---: | :---: |
|UBERON|2024-09-03|
|CL|2024-09-26|
|PCL|2024-07-11|
|CL|2024-09-26|

### ASCT+b Tables

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2 changes: 1 addition & 1 deletion docs/Anatomical_Systems/README.md
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ASCT+B Validation Reports for Anatomical_Systems (2024-10-30)
ASCT+B Validation Reports for Anatomical_Systems (2024-11-06)
=============================================================

Table of contents
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ASCT+B Validation Reports for Anatomical_Systems (2024-10-30)
ASCT+B Validation Reports for Anatomical_Systems (2024-11-06)
=============================================================

# ASCT+B as Graph
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2 changes: 1 addition & 1 deletion docs/Blood/README.md
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ASCT+B Validation Reports for Blood (2024-10-30)
ASCT+B Validation Reports for Blood (2024-11-06)
================================================

Table of contents
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ASCT+B Validation Reports for Blood (2024-10-30)
ASCT+B Validation Reports for Blood (2024-11-06)
================================================

# ASCT+B as Graph
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2 changes: 1 addition & 1 deletion docs/Blood_vasculature/README.md
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ASCT+B Validation Reports for Blood_vasculature (2024-10-30)
ASCT+B Validation Reports for Blood_vasculature (2024-11-06)
============================================================

Table of contents
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ASCT+B Validation Reports for Blood_vasculature (2024-10-30)
ASCT+B Validation Reports for Blood_vasculature (2024-11-06)
============================================================

# ASCT+B as Graph
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2 changes: 1 addition & 1 deletion docs/Bone-Marrow/README.md
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ASCT+B Validation Reports for Bone-Marrow (2024-10-30)
ASCT+B Validation Reports for Bone-Marrow (2024-11-06)
======================================================

Table of contents
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ASCT+B Validation Reports for Bone-Marrow (2024-10-30)
ASCT+B Validation Reports for Bone-Marrow (2024-11-06)
======================================================

# ASCT+B as Graph
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2 changes: 1 addition & 1 deletion docs/Brain/README.md
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ASCT+B Validation Reports for Brain (2024-10-30)
ASCT+B Validation Reports for Brain (2024-11-06)
================================================

Table of contents
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ASCT+B Validation Reports for Brain (2024-10-30)
ASCT+B Validation Reports for Brain (2024-11-06)
================================================

# ASCT+B as Graph
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6 changes: 3 additions & 3 deletions docs/Eye/README.md
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ASCT+B Validation Reports for Eye (2024-10-30)
ASCT+B Validation Reports for Eye (2024-11-06)
==============================================

Table of contents
Expand Down Expand Up @@ -52,10 +52,10 @@ If the term's name/label and the name/label given by SME are too different, plea

If the name/label in the ontology contains *obsolete*, please look into OLS, clicking on the term ID, for its replacement.

1. The term _[UBERON:0004904](http://purl.obolibrary.org/obo/UBERON_0004904)_ has a different name/label in the source ontology in the following 2 rows _[70](https://docs.google.com/spreadsheets/d/1tNNPZXL0ycw5gNksDUKHZJpRkKgRdVAUh9AZ6ohpgOA/edit#gid=695483621&range=70:70)_, _[70](https://docs.google.com/spreadsheets/d/1tNNPZXL0ycw5gNksDUKHZJpRkKgRdVAUh9AZ6ohpgOA/edit#gid=695483621&range=70:70)_. The name/label in the **ASCT+B table** is _optic nerve_ and the one in the **ontology** is _neuron projection bundle connecting eye with brain_. For reference, the given name/label **by SMEs** is _neuron projection bundle connecting eye with brain_. Please correct it in the columns AS/N/LABEL or CT/N/LABEL in the ASCT+B table.

1. The term _[UBERON:0000965](http://purl.obolibrary.org/obo/UBERON_0000965)_ has a different name/label in the source ontology in the following 2 rows _[59](https://docs.google.com/spreadsheets/d/1tNNPZXL0ycw5gNksDUKHZJpRkKgRdVAUh9AZ6ohpgOA/edit#gid=695483621&range=59:59)_, _[59](https://docs.google.com/spreadsheets/d/1tNNPZXL0ycw5gNksDUKHZJpRkKgRdVAUh9AZ6ohpgOA/edit#gid=695483621&range=59:59)_. The name/label in the **ASCT+B table** is _lens_ and the one in the **ontology** is _lens of camera-type eye_. For reference, the given name/label **by SMEs** is _lens_. Please correct it in the columns AS/N/LABEL or CT/N/LABEL in the ASCT+B table.

1. The term _[UBERON:0004904](http://purl.obolibrary.org/obo/UBERON_0004904)_ has a different name/label in the source ontology in the following 2 rows _[70](https://docs.google.com/spreadsheets/d/1tNNPZXL0ycw5gNksDUKHZJpRkKgRdVAUh9AZ6ohpgOA/edit#gid=695483621&range=70:70)_, _[70](https://docs.google.com/spreadsheets/d/1tNNPZXL0ycw5gNksDUKHZJpRkKgRdVAUh9AZ6ohpgOA/edit#gid=695483621&range=70:70)_. The name/label in the **ASCT+B table** is _optic nerve_ and the one in the **ontology** is _neuron projection bundle connecting eye with brain_. For reference, the given name/label **by SMEs** is _neuron projection bundle connecting eye with brain_. Please correct it in the columns AS/N/LABEL or CT/N/LABEL in the ASCT+B table.


## Blank ontology ID

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2 changes: 1 addition & 1 deletion docs/Eye/graph.md
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ASCT+B Validation Reports for Eye (2024-10-30)
ASCT+B Validation Reports for Eye (2024-11-06)
==============================================

# ASCT+B as Graph
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28 changes: 14 additions & 14 deletions docs/Eye/logs_dict.json
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],
"no_found_id": [],
"diff_label": [
{
"id": "UBERON:0004904",
"label": "neuron projection bundle connecting eye with brain",
"asct_label": "optic nerve",
"user_label": "neuron projection bundle connecting eye with brain",
"row_number": 70
},
{
"id": "UBERON:0004904",
"label": "neuron projection bundle connecting eye with brain",
"asct_label": "optic nerve",
"user_label": "neuron projection bundle connecting eye with brain",
"row_number": 70
},
{
"id": "UBERON:0000965",
"label": "lens of camera-type eye",
Expand All @@ -108,6 +94,20 @@
"asct_label": "lens",
"user_label": "lens",
"row_number": 59
},
{
"id": "UBERON:0004904",
"label": "neuron projection bundle connecting eye with brain",
"asct_label": "optic nerve",
"user_label": "neuron projection bundle connecting eye with brain",
"row_number": 70
},
{
"id": "UBERON:0004904",
"label": "neuron projection bundle connecting eye with brain",
"asct_label": "optic nerve",
"user_label": "neuron projection bundle connecting eye with brain",
"row_number": 70
}
],
"no_parent": [
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2 changes: 1 addition & 1 deletion docs/Fallopian_tube/README.md
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ASCT+B Validation Reports for Fallopian_tube (2024-10-30)
ASCT+B Validation Reports for Fallopian_tube (2024-11-06)
=========================================================

Table of contents
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2 changes: 1 addition & 1 deletion docs/Fallopian_tube/graph.md
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ASCT+B Validation Reports for Fallopian_tube (2024-10-30)
ASCT+B Validation Reports for Fallopian_tube (2024-11-06)
=========================================================

# ASCT+B as Graph
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6 changes: 3 additions & 3 deletions docs/Heart/README.md
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ASCT+B Validation Reports for Heart (2024-10-30)
ASCT+B Validation Reports for Heart (2024-11-06)
================================================

Table of contents
Expand Down Expand Up @@ -52,10 +52,10 @@ If the term's name/label and the name/label given by SME are too different, plea

If the name/label in the ontology contains *obsolete*, please look into OLS, clicking on the term ID, for its replacement.

1. The term _[CL:0000097](http://purl.obolibrary.org/obo/CL_0000097)_ has a different name/label in the source ontology in the following 4 rows _[104](https://docs.google.com/spreadsheets/d/1kDn3zoY_5NmGCfemBLdshDT7JVUWtEMSGBrD4jsHeK0/edit#gid=1759721736&range=104:104)_, _[152](https://docs.google.com/spreadsheets/d/1kDn3zoY_5NmGCfemBLdshDT7JVUWtEMSGBrD4jsHeK0/edit#gid=1759721736&range=152:152)_, _[158](https://docs.google.com/spreadsheets/d/1kDn3zoY_5NmGCfemBLdshDT7JVUWtEMSGBrD4jsHeK0/edit#gid=1759721736&range=158:158)_, _[212](https://docs.google.com/spreadsheets/d/1kDn3zoY_5NmGCfemBLdshDT7JVUWtEMSGBrD4jsHeK0/edit#gid=1759721736&range=212:212)_. The name/label in the **ASCT+B table** is _mast cell _ and the one in the **ontology** is _mast cell_. For reference, the given name/label **by SMEs** is _mast cell_. Please correct it in the columns AS/N/LABEL or CT/N/LABEL in the ASCT+B table.

1. The term _[CL:0000136](http://purl.obolibrary.org/obo/CL_0000136)_ has a different name/label in the source ontology in the following 5 rows _[37](https://docs.google.com/spreadsheets/d/1kDn3zoY_5NmGCfemBLdshDT7JVUWtEMSGBrD4jsHeK0/edit#gid=1759721736&range=37:37)_, _[48](https://docs.google.com/spreadsheets/d/1kDn3zoY_5NmGCfemBLdshDT7JVUWtEMSGBrD4jsHeK0/edit#gid=1759721736&range=48:48)_, _[90](https://docs.google.com/spreadsheets/d/1kDn3zoY_5NmGCfemBLdshDT7JVUWtEMSGBrD4jsHeK0/edit#gid=1759721736&range=90:90)_, _[103](https://docs.google.com/spreadsheets/d/1kDn3zoY_5NmGCfemBLdshDT7JVUWtEMSGBrD4jsHeK0/edit#gid=1759721736&range=103:103)_, _[186](https://docs.google.com/spreadsheets/d/1kDn3zoY_5NmGCfemBLdshDT7JVUWtEMSGBrD4jsHeK0/edit#gid=1759721736&range=186:186)_. The name/label in the **ASCT+B table** is _fat cell_ and the one in the **ontology** is _adipocyte_. For reference, the given name/label **by SMEs** is _adipocyte_. Please correct it in the columns AS/N/LABEL or CT/N/LABEL in the ASCT+B table.

1. The term _[CL:0000097](http://purl.obolibrary.org/obo/CL_0000097)_ has a different name/label in the source ontology in the following 4 rows _[104](https://docs.google.com/spreadsheets/d/1kDn3zoY_5NmGCfemBLdshDT7JVUWtEMSGBrD4jsHeK0/edit#gid=1759721736&range=104:104)_, _[152](https://docs.google.com/spreadsheets/d/1kDn3zoY_5NmGCfemBLdshDT7JVUWtEMSGBrD4jsHeK0/edit#gid=1759721736&range=152:152)_, _[158](https://docs.google.com/spreadsheets/d/1kDn3zoY_5NmGCfemBLdshDT7JVUWtEMSGBrD4jsHeK0/edit#gid=1759721736&range=158:158)_, _[212](https://docs.google.com/spreadsheets/d/1kDn3zoY_5NmGCfemBLdshDT7JVUWtEMSGBrD4jsHeK0/edit#gid=1759721736&range=212:212)_. The name/label in the **ASCT+B table** is _mast cell _ and the one in the **ontology** is _mast cell_. For reference, the given name/label **by SMEs** is _mast cell_. Please correct it in the columns AS/N/LABEL or CT/N/LABEL in the ASCT+B table.


## Blank ontology ID

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2 changes: 1 addition & 1 deletion docs/Heart/graph.md
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ASCT+B Validation Reports for Heart (2024-10-30)
ASCT+B Validation Reports for Heart (2024-11-06)
================================================

# ASCT+B as Graph
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56 changes: 28 additions & 28 deletions docs/Heart/logs_dict.json
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],
"no_found_id": [],
"diff_label": [
{
"id": "CL:0000097",
"label": "mast cell",
"asct_label": "mast cell ",
"user_label": "mast cell",
"row_number": 104
},
{
"id": "CL:0000097",
"label": "mast cell",
"asct_label": "mast cell ",
"user_label": "mast cell",
"row_number": 152
},
{
"id": "CL:0000097",
"label": "mast cell",
"asct_label": "mast cell ",
"user_label": "mast cell",
"row_number": 158
},
{
"id": "CL:0000097",
"label": "mast cell",
"asct_label": "mast cell ",
"user_label": "mast cell",
"row_number": 212
},
{
"id": "CL:0000136",
"label": "adipocyte",
Expand Down Expand Up @@ -713,6 +685,34 @@
"asct_label": "fat cell",
"user_label": "adipocyte",
"row_number": 186
},
{
"id": "CL:0000097",
"label": "mast cell",
"asct_label": "mast cell ",
"user_label": "mast cell",
"row_number": 104
},
{
"id": "CL:0000097",
"label": "mast cell",
"asct_label": "mast cell ",
"user_label": "mast cell",
"row_number": 152
},
{
"id": "CL:0000097",
"label": "mast cell",
"asct_label": "mast cell ",
"user_label": "mast cell",
"row_number": 158
},
{
"id": "CL:0000097",
"label": "mast cell",
"asct_label": "mast cell ",
"user_label": "mast cell",
"row_number": 212
}
],
"no_parent": []
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8 changes: 4 additions & 4 deletions docs/Kidney/README.md
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ASCT+B Validation Reports for Kidney (2024-10-30)
ASCT+B Validation Reports for Kidney (2024-11-06)
=================================================

Table of contents
Expand Down Expand Up @@ -52,15 +52,15 @@ If the term's name/label and the name/label given by SME are too different, plea

If the name/label in the ontology contains *obsolete*, please look into OLS, clicking on the term ID, for its replacement.

1. The term _[CL:1000718](http://purl.obolibrary.org/obo/CL_1000718)_ has a different name/label in the source ontology in the following 1 row _[51](https://docs.google.com/spreadsheets/d/1CS-Tplkosorg8q6Ci8oALTvt9ufvEyDmCNAI2LsKM_g/edit#gid=949267305&range=51:51)_. The name/label in the **ASCT+B table** is _kidney inner medulla collecting duct_ and the one in the **ontology** is _kidney inner medulla collecting duct principal cell_. For reference, the given name/label **by SMEs** is _Inner Medullary Collecting Duct Cell_. Please correct it in the columns AS/N/LABEL or CT/N/LABEL in the ASCT+B table.
1. The term _[UBERON:8600037](http://purl.obolibrary.org/obo/UBERON_8600037)_ has a different name/label in the source ontology in the following 2 rows _[33](https://docs.google.com/spreadsheets/d/1CS-Tplkosorg8q6Ci8oALTvt9ufvEyDmCNAI2LsKM_g/edit#gid=949267305&range=33:33)_, _[33](https://docs.google.com/spreadsheets/d/1CS-Tplkosorg8q6Ci8oALTvt9ufvEyDmCNAI2LsKM_g/edit#gid=949267305&range=33:33)_. The name/label in the **ASCT+B table** is _long descending limb of the loop of Henle in the inner medulla_ and the one in the **ontology** is _kidney loop of Henle long descending thin limb inner medulla_. For reference, the given name/label **by SMEs** is _descending thin limb of loop of Henle 3_. Please correct it in the columns AS/N/LABEL or CT/N/LABEL in the ASCT+B table.

1. The term _[CL:0000653](http://purl.obolibrary.org/obo/CL_0000653)_ has a different name/label in the source ontology in the following 2 rows _[14](https://docs.google.com/spreadsheets/d/1CS-Tplkosorg8q6Ci8oALTvt9ufvEyDmCNAI2LsKM_g/edit#gid=949267305&range=14:14)_, _[20](https://docs.google.com/spreadsheets/d/1CS-Tplkosorg8q6Ci8oALTvt9ufvEyDmCNAI2LsKM_g/edit#gid=949267305&range=20:20)_. The name/label in the **ASCT+B table** is _glomerular visceral epithelial cell_ and the one in the **ontology** is _podocyte_. For reference, the given name/label **by SMEs** is _Podocyte_. Please correct it in the columns AS/N/LABEL or CT/N/LABEL in the ASCT+B table.

1. The term _[UBERON:8600036](http://purl.obolibrary.org/obo/UBERON_8600036)_ has a different name/label in the source ontology in the following 4 rows _[17](https://docs.google.com/spreadsheets/d/1CS-Tplkosorg8q6Ci8oALTvt9ufvEyDmCNAI2LsKM_g/edit#gid=949267305&range=17:17)_, _[17](https://docs.google.com/spreadsheets/d/1CS-Tplkosorg8q6Ci8oALTvt9ufvEyDmCNAI2LsKM_g/edit#gid=949267305&range=17:17)_, _[32](https://docs.google.com/spreadsheets/d/1CS-Tplkosorg8q6Ci8oALTvt9ufvEyDmCNAI2LsKM_g/edit#gid=949267305&range=32:32)_, _[32](https://docs.google.com/spreadsheets/d/1CS-Tplkosorg8q6Ci8oALTvt9ufvEyDmCNAI2LsKM_g/edit#gid=949267305&range=32:32)_. The name/label in the **ASCT+B table** is _long descending limb of the loop of Henle in the outer medulla _ and the one in the **ontology** is _kidney loop of Henle long descending thin limb outer medulla_. For reference, the given name/label **by SMEs** is _descending thin limb of loop of Henle 2_. Please correct it in the columns AS/N/LABEL or CT/N/LABEL in the ASCT+B table.
1. The term _[CL:1000718](http://purl.obolibrary.org/obo/CL_1000718)_ has a different name/label in the source ontology in the following 1 row _[51](https://docs.google.com/spreadsheets/d/1CS-Tplkosorg8q6Ci8oALTvt9ufvEyDmCNAI2LsKM_g/edit#gid=949267305&range=51:51)_. The name/label in the **ASCT+B table** is _kidney inner medulla collecting duct_ and the one in the **ontology** is _kidney inner medulla collecting duct principal cell_. For reference, the given name/label **by SMEs** is _Inner Medullary Collecting Duct Cell_. Please correct it in the columns AS/N/LABEL or CT/N/LABEL in the ASCT+B table.

1. The term _[CL:1000454](http://purl.obolibrary.org/obo/CL_1000454)_ has a different name/label in the source ontology in the following 1 row _[52](https://docs.google.com/spreadsheets/d/1CS-Tplkosorg8q6Ci8oALTvt9ufvEyDmCNAI2LsKM_g/edit#gid=949267305&range=52:52)_. The name/label in the **ASCT+B table** is _kidney collecting duct epithelial cell _ and the one in the **ontology** is _kidney collecting duct epithelial cell_. For reference, the given name/label **by SMEs** is _kidney collecting duct epithelial cell _. Please correct it in the columns AS/N/LABEL or CT/N/LABEL in the ASCT+B table.

1. The term _[UBERON:8600037](http://purl.obolibrary.org/obo/UBERON_8600037)_ has a different name/label in the source ontology in the following 2 rows _[33](https://docs.google.com/spreadsheets/d/1CS-Tplkosorg8q6Ci8oALTvt9ufvEyDmCNAI2LsKM_g/edit#gid=949267305&range=33:33)_, _[33](https://docs.google.com/spreadsheets/d/1CS-Tplkosorg8q6Ci8oALTvt9ufvEyDmCNAI2LsKM_g/edit#gid=949267305&range=33:33)_. The name/label in the **ASCT+B table** is _long descending limb of the loop of Henle in the inner medulla_ and the one in the **ontology** is _kidney loop of Henle long descending thin limb inner medulla_. For reference, the given name/label **by SMEs** is _descending thin limb of loop of Henle 3_. Please correct it in the columns AS/N/LABEL or CT/N/LABEL in the ASCT+B table.
1. The term _[UBERON:8600036](http://purl.obolibrary.org/obo/UBERON_8600036)_ has a different name/label in the source ontology in the following 4 rows _[17](https://docs.google.com/spreadsheets/d/1CS-Tplkosorg8q6Ci8oALTvt9ufvEyDmCNAI2LsKM_g/edit#gid=949267305&range=17:17)_, _[17](https://docs.google.com/spreadsheets/d/1CS-Tplkosorg8q6Ci8oALTvt9ufvEyDmCNAI2LsKM_g/edit#gid=949267305&range=17:17)_, _[32](https://docs.google.com/spreadsheets/d/1CS-Tplkosorg8q6Ci8oALTvt9ufvEyDmCNAI2LsKM_g/edit#gid=949267305&range=32:32)_, _[32](https://docs.google.com/spreadsheets/d/1CS-Tplkosorg8q6Ci8oALTvt9ufvEyDmCNAI2LsKM_g/edit#gid=949267305&range=32:32)_. The name/label in the **ASCT+B table** is _long descending limb of the loop of Henle in the outer medulla _ and the one in the **ontology** is _kidney loop of Henle long descending thin limb outer medulla_. For reference, the given name/label **by SMEs** is _descending thin limb of loop of Henle 2_. Please correct it in the columns AS/N/LABEL or CT/N/LABEL in the ASCT+B table.


## Blank ontology ID
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ASCT+B Validation Reports for Kidney (2024-10-30)
ASCT+B Validation Reports for Kidney (2024-11-06)
=================================================

# ASCT+B as Graph
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