Automated report

hubmapconsortium · Nov 29, 2023 · 01ec54f · 01ec54f
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diff --git a/NOTES.md b/NOTES.md
@@ -20,22 +20,22 @@ Release Notes
 |Brain|v1.5|December 15, 2023|
 |Eye|v1.4|revise for October 1, 2023|
 |Fallopian_tube|v1.2|December 15, 2023|
-|Heart|v1.3|revise for October 1, 2023|
+|Heart|v1.3|December 15, 2023|
 |Kidney|v1.4|December 15, 2023|
 |Knee|v1.1|December 15, 2023|
 |Large_intestine|v1.4|revise for October, 2023|
 |Liver|v1.2|December 15, 2023|
 |Lung|v1.4|December 15, 2023|
 |Lymph_node|v1.3|revise for October 1, 2023|
-|Lymph_vasculature|v1.4|September 27, 2023|
+|Lymph_vasculature|v1.4|December 15, 2023|
 |Main_Bronchus|v1.1|December 15, 2023|
 |Mammary_Gland|v1.0|revise for October 1, 2023|
-|Muscular_System|v1.1|September 27, 2023|
+|Muscular_System|v1.1|December 15, 2023|
 |Ovary|v1.3|revise for April 1, 2023|
-|Pancreas|v1.3|revise for October 1, 2023|
-|Palatine_Tonsil|V1.0|revise for October 1, 2023|
-|Peripheral_nervous_system|v1.1|revise for Oct 1, 2023|
-|Placenta|v1.1|December 1, 2023|
+|Pancreas|v1.3|December 15, 2023|
+|Palatine_Tonsil|V1.0|December 15, 2023|
+|Peripheral_nervous_system|v1.1|December 15, 2023|
+|Placenta|v1.1|December 15, 2023|
 |Prostate|v1.1|revise for Oct 1, 2023|
 |Skeleton|v1.1|December 15, 2023|
 |Skin|v1.3|December 15, 2023|

diff --git a/docs/Anatomical_Systems/README.md b/docs/Anatomical_Systems/README.md
@@ -1,5 +1,5 @@
 
-ASCT+B Validation Reports for Anatomical_Systems (2023-11-22)
+ASCT+B Validation Reports for Anatomical_Systems (2023-11-29)
 =============================================================
 
 Table of contents

diff --git a/docs/Anatomical_Systems/assets/ccf_Anatomical_Systems_graph.pdf b/docs/Anatomical_Systems/assets/ccf_Anatomical_Systems_graph.pdf
diff --git a/docs/Anatomical_Systems/assets/ccf_Anatomical_Systems_graph.png b/docs/Anatomical_Systems/assets/ccf_Anatomical_Systems_graph.png
diff --git a/docs/Anatomical_Systems/class_Anatomical_Systems_indirect_log.tsv b/docs/Anatomical_Systems/class_Anatomical_Systems_indirect_log.tsv
@@ -1,6 +1,7 @@
 s	slabel	user_slabel	o	olabel	user_olabel	row_number
 UBERON:0000065	respiratory tract	respiratory tract	UBERON:0001004	respiratory system	respiratory system	36
 UBERON:0000065	respiratory tract	respiratory tract	UBERON:0001004	respiratory system	respiratory system	37
+UBERON:0001224	renal pelvis	renal pelvis	UBERON:0011143	kidney	kidney	40
 UBERON:0001557	upper respiratory tract	upper respiratory tract	UBERON:0000065	respiratory tract	respiratory tract	36
 UBERON:0001558	lower respiratory tract	lower respiratory tract	UBERON:0000065	respiratory tract	respiratory tract	37
 UBERON:0001911	mammary gland	mammary gland	UBERON:0002416	integumental system	integumental system	31

diff --git a/docs/Anatomical_Systems/graph.md b/docs/Anatomical_Systems/graph.md
@@ -1,5 +1,5 @@
 
-ASCT+B Validation Reports for Anatomical_Systems (2023-11-22)
+ASCT+B Validation Reports for Anatomical_Systems (2023-11-29)
 =============================================================
 
 # ASCT+B as Graph

diff --git a/docs/Blood/README.md b/docs/Blood/README.md
@@ -1,5 +1,5 @@
 
-ASCT+B Validation Reports for Blood (2023-11-22)
+ASCT+B Validation Reports for Blood (2023-11-29)
 ================================================
 
 Table of contents

diff --git a/docs/Blood/assets/ccf_Blood_graph.pdf b/docs/Blood/assets/ccf_Blood_graph.pdf
diff --git a/docs/Blood/graph.md b/docs/Blood/graph.md
@@ -1,5 +1,5 @@
 
-ASCT+B Validation Reports for Blood (2023-11-22)
+ASCT+B Validation Reports for Blood (2023-11-29)
 ================================================
 
 # ASCT+B as Graph

diff --git a/docs/Blood_vasculature/README.md b/docs/Blood_vasculature/README.md
@@ -1,5 +1,5 @@
 
-ASCT+B Validation Reports for Blood_vasculature (2023-11-22)
+ASCT+B Validation Reports for Blood_vasculature (2023-11-29)
 ============================================================
 
 Table of contents

diff --git a/docs/Blood_vasculature/assets/ccf_Blood_vasculature_graph.pdf b/docs/Blood_vasculature/assets/ccf_Blood_vasculature_graph.pdf
diff --git a/docs/Blood_vasculature/graph.md b/docs/Blood_vasculature/graph.md
@@ -1,5 +1,5 @@
 
-ASCT+B Validation Reports for Blood_vasculature (2023-11-22)
+ASCT+B Validation Reports for Blood_vasculature (2023-11-29)
 ============================================================
 
 # ASCT+B as Graph

diff --git a/docs/Bone-Marrow/README.md b/docs/Bone-Marrow/README.md
@@ -1,5 +1,5 @@
 
-ASCT+B Validation Reports for Bone-Marrow (2023-11-22)
+ASCT+B Validation Reports for Bone-Marrow (2023-11-29)
 ======================================================
 
 Table of contents

diff --git a/docs/Bone-Marrow/assets/ccf_Bone-Marrow_graph.pdf b/docs/Bone-Marrow/assets/ccf_Bone-Marrow_graph.pdf
diff --git a/docs/Bone-Marrow/graph.md b/docs/Bone-Marrow/graph.md
@@ -1,5 +1,5 @@
 
-ASCT+B Validation Reports for Bone-Marrow (2023-11-22)
+ASCT+B Validation Reports for Bone-Marrow (2023-11-29)
 ======================================================
 
 # ASCT+B as Graph

diff --git a/docs/Brain/README.md b/docs/Brain/README.md
@@ -1,5 +1,5 @@
 
-ASCT+B Validation Reports for Brain (2023-11-22)
+ASCT+B Validation Reports for Brain (2023-11-29)
 ================================================
 
 Table of contents

diff --git a/docs/Brain/assets/ccf_Brain_graph.pdf b/docs/Brain/assets/ccf_Brain_graph.pdf
diff --git a/docs/Brain/graph.md b/docs/Brain/graph.md
@@ -1,5 +1,5 @@
 
-ASCT+B Validation Reports for Brain (2023-11-22)
+ASCT+B Validation Reports for Brain (2023-11-29)
 ================================================
 
 # ASCT+B as Graph

diff --git a/docs/Eye/README.md b/docs/Eye/README.md
@@ -1,5 +1,5 @@
 
-ASCT+B Validation Reports for Eye (2023-11-22)
+ASCT+B Validation Reports for Eye (2023-11-29)
 ==============================================
 
 Table of contents

diff --git a/docs/Eye/assets/ccf_Eye_graph.pdf b/docs/Eye/assets/ccf_Eye_graph.pdf
diff --git a/docs/Eye/graph.md b/docs/Eye/graph.md
@@ -1,5 +1,5 @@
 
-ASCT+B Validation Reports for Eye (2023-11-22)
+ASCT+B Validation Reports for Eye (2023-11-29)
 ==============================================
 
 # ASCT+B as Graph

diff --git a/docs/Fallopian_tube/README.md b/docs/Fallopian_tube/README.md
@@ -1,5 +1,5 @@
 
-ASCT+B Validation Reports for Fallopian_tube (2023-11-22)
+ASCT+B Validation Reports for Fallopian_tube (2023-11-29)
 =========================================================
 
 Table of contents

diff --git a/docs/Fallopian_tube/assets/ccf_Fallopian_tube_graph.pdf b/docs/Fallopian_tube/assets/ccf_Fallopian_tube_graph.pdf
diff --git a/docs/Fallopian_tube/graph.md b/docs/Fallopian_tube/graph.md
@@ -1,5 +1,5 @@
 
-ASCT+B Validation Reports for Fallopian_tube (2023-11-22)
+ASCT+B Validation Reports for Fallopian_tube (2023-11-29)
 =========================================================
 
 # ASCT+B as Graph

diff --git a/docs/Heart/README.md b/docs/Heart/README.md
@@ -1,5 +1,5 @@
 
-ASCT+B Validation Reports for Heart (2023-11-22)
+ASCT+B Validation Reports for Heart (2023-11-29)
 ================================================
 
 Table of contents

diff --git a/docs/Heart/assets/ccf_Heart_graph.pdf b/docs/Heart/assets/ccf_Heart_graph.pdf
diff --git a/docs/Heart/graph.md b/docs/Heart/graph.md
@@ -1,5 +1,5 @@
 
-ASCT+B Validation Reports for Heart (2023-11-22)
+ASCT+B Validation Reports for Heart (2023-11-29)
 ================================================
 
 # ASCT+B as Graph

diff --git a/docs/Kidney/README.md b/docs/Kidney/README.md
@@ -1,5 +1,5 @@
 
-ASCT+B Validation Reports for Kidney (2023-11-22)
+ASCT+B Validation Reports for Kidney (2023-11-29)
 =================================================
 
 Table of contents

diff --git a/docs/Kidney/assets/ccf_Kidney_graph.pdf b/docs/Kidney/assets/ccf_Kidney_graph.pdf
diff --git a/docs/Kidney/graph.md b/docs/Kidney/graph.md
@@ -1,5 +1,5 @@
 
-ASCT+B Validation Reports for Kidney (2023-11-22)
+ASCT+B Validation Reports for Kidney (2023-11-29)
 =================================================
 
 # ASCT+B as Graph

diff --git a/docs/Knee/README.md b/docs/Knee/README.md
@@ -1,5 +1,5 @@
 
-ASCT+B Validation Reports for Knee (2023-11-22)
+ASCT+B Validation Reports for Knee (2023-11-29)
 ===============================================
 
 Table of contents

diff --git a/docs/Knee/assets/ccf_Knee_graph.pdf b/docs/Knee/assets/ccf_Knee_graph.pdf
diff --git a/docs/Knee/graph.md b/docs/Knee/graph.md
@@ -1,5 +1,5 @@
 
-ASCT+B Validation Reports for Knee (2023-11-22)
+ASCT+B Validation Reports for Knee (2023-11-29)
 ===============================================
 
 # ASCT+B as Graph