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updated installation instructions
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hkmztrk committed Aug 16, 2023
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7 changes: 5 additions & 2 deletions README.md
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Expand Up @@ -7,17 +7,20 @@ The approach used in this work is the modeling of protein sequences and compound

## Data

Please see the [readme](https://github.com/hkmztrk/DeepDTA/blob/master/data/README.md) for detailed explanation.
Please see the [README](https://github.com/hkmztrk/DeepDTA/blob/master/data/README.md) for detailed explanation.

## Requirements

You'll need to install following in order to run the codes.
You'll need to install following in order to run the codes. Refer to [deepdta.yml](https://github.com/hkmztrk/DeepDTA/blob/master/deepdta.yml) for a conda environment tested in Linux.

* [Python 3.4 <=](https://www.python.org/downloads/)
* [Keras 2.x](https://pypi.org/project/Keras/)
* [Tensorflow 1.x](https://www.tensorflow.org/install/)
* numpy
* matplotlib
* scikit-learn



You have to place "data" folder under "source" directory.

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9 changes: 9 additions & 0 deletions deepdta.yml
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name: deepdta
channels:
- defaults
dependencies:
- python=3.6
- keras==2.1.6
- tensorflow-gpu==1.15.0
- scikit-learn==0.22

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