Merge branch 'master' into margo/readjson

hcs-t4sg · Oct 8, 2023 · 31a21f7 · 31a21f7
2 parents 4ee6c29 + 82112c5
commit 31a21f7
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diff --git a/ersilia/core/tracking.py b/ersilia/core/tracking.py
@@ -1,4 +1,5 @@
 import json
+import pandas as pd
 
 class RunTracker:
     """
@@ -8,13 +9,20 @@ class RunTracker:
     NOTE: Currently, the Splunk connection is not set up. For now, we will print tracking results to the console.
     """
 
+    def read_csv(self, file):
+        # reads csv file and returns Pandas dataframe
+        return pd.read_csv(file)
+
     def track(self, input, result, meta):
         """
         Tracks the results after a model run.
         """
 
         print("Run input file:", input)
+        print(self.read_csv(input))
+
         print("Run output file:", result)
+        print(self.read_csv(result))
 
         print("Model metadata:", meta)
 

diff --git a/pyproject.toml b/pyproject.toml
@@ -34,6 +34,10 @@ validators = [
     {version="0.20.0", python="3.7.*"},
     {version="~0.21.0", python=">=3.8"},
 ]
+pandas = [
+    {version="1.2.4", python="3.7.*"},
+    {version="~1.3.0", python=">=3.8"},
+]
 h5py = "^3.7.0" # For compatibility with isaura
 loguru = "^0.6.0" # For compatibility with isaura
 pyairtable = "<2"