upgrade dependencies

.github/workflows/publish.yml

@@ -11,12 +11,12 @@ jobs:
     steps:
       - uses: actions/checkout@v2
       - name: Set up Python
-        uses: actions/setup-python@v2.2.2
+        uses: actions/setup-python@v2
         with:
           python-version: 3.9
 
       - name: Install Poetry
-        uses: snok/install-poetry@v1.1.6
+        uses: snok/install-poetry@v1
         with:
           virtualenvs-create: true
           virtualenvs-in-project: true
@@ -40,7 +40,7 @@ jobs:
         with:
           password: ${{ secrets.TEST_PYPI_API_TOKEN }}
           repository_url: https://test.pypi.org/legacy/
-          
+
       - name: Publish distribution to PyPI
         uses: pypa/gh-action-pypi-publish@release/v1
         with:
@@ -49,7 +49,7 @@ jobs:
       - name: Set version
         run: |
           echo "H1ST_VERSION=$(poetry version -s)" >> $GITHUB_ENV
-        
+
       - name: Create tag using environment variable for version
         uses: julb/action-manage-tag@v1
         with:

.github/workflows/test.yml

@@ -48,12 +48,12 @@ jobs:
       - uses: actions/checkout@v2
 
       - name: Setup Python
-        uses: actions/setup-python@v2.2.2
+        uses: actions/setup-python@v2
         with:
           python-version: ${{ matrix.python-version }}
 
       - name: Install Poetry
-        uses: snok/install-poetry@v1.1.6
+        uses: snok/install-poetry@v1
         with:
           virtualenvs-create: true
           virtualenvs-in-project: true
@@ -68,7 +68,7 @@ jobs:
   test_arm_linux:
     needs: sanityCheck
     runs-on: self-hosted-arm-linux
-    container: 
+    container:
       image: ${{ matrix.docker-image }}
     strategy:
       fail-fast: false
@@ -99,4 +99,4 @@ jobs:
       - name: Post clean up the home dir with poetry cache
         run: |
           rm -rf /github/home/.cache/
-          rm -rf /github/home/.local/
+          rm -rf /github/home/.local/

docs/source/doc-requirements.txt

@@ -1,9 +1,9 @@
-numpy==1.22.1
-pandas==1.4.0
-s3fs==2022.1.0
-shap==0.40.0
-sklearn
-ulid
-sphinx_rtd_theme===1.0.0
+numpy >= 1.23
+pandas >= 1.5
+s3fs >= 2023.6.0
+shap >= 0.42.1
+scikit-learn >= 1.3.0
+ulid >= 1.1
+sphinx_rtd_theme >= 1.2.2
 h1st
-sphinx-autoapi==1.8.4
+sphinx-autoapi >= 2.1.1

pyproject.toml

@@ -7,49 +7,63 @@ license = "Apache-2.0"
 readme = "README.md"
 homepage = "https://h1st.ai"
 repository = "https://github.com/h1st-ai/h1st"
-include = ["h1st/*"]
+packages = [
+  {include = "h1st"},
+]
+include = [
+  "h1st/*",
+]
+
 
 [tool.poetry.dependencies]
-python = ">=3.8,<3.11"
+python = ">= 3.8, < 4"
 
 # Data Processing
-numpy = "~1.22.4"   # let higher dependencies figure
-pandas = "~1.5.0"
-pyarrow = "~9.0.0"
+numpy = ">= 1.23"  # let higher dependencies figure
+pandas = ">= 1.5"  # let higher dependencies figure
+pyarrow = ">= 12.0.1"
+
+# Machine Learning
+scikit-learn = ">= 1.3.0"
+xgboost = ">= 1.7.6"
 
-# Machine Learning / Deep Learning
-scikit-learn = "~1.1.2"
-xgboost = "~1.7.2"
+# Fuzzy Logic
+scikit-fuzzy = ">= 0.4.2"
 
 # Trustworthy AI
-graphviz = "~0.20.1"
-lime = "~0.2.0.1"
-shap = "~0.41.0"
+graphviz = ">= 0.20.1"
+lime = ">= 0.2.0.1"
+shap = ">= 0.42.1"
 
 # File Systems
-fsspec = "~2022.8.2"
-s3fs = "~2022.8.2"
+fsspec = ">= 2023.6.0"
+s3fs = ">= 2023.6.0"
 
 # misc/other
-click = "~8.0.4"   # let higher dependencies figure
-python-dotenv = "~0.21.0"
-pyyaml = "~6.0"
-"ruamel.yaml" = "~0.17.21"
-tqdm = "~4.64.1"
-ulid-py = "~1.1.0"
-loguru = "~0.6.0"
+click = ">= 8.1.6"
+loguru = ">= 0.7.0"
+python-dotenv = ">= 1.0.0"
+pyyaml = ">= 6.0.1"
+"ruamel.yaml" = ">= 0.17.21"
+tqdm = ">= 4.65.0"
+ulid-py = ">= 1.1.0"
+
 
 [tool.poetry.dev-dependencies]
-commitizen = "~2.34.0"
-pre-commit = "~2.20.0"
-pylint = "~2.15.3"
-pytest = "~7.1.3"
-sphinx = "~5.1.1"
-sphinx-rtd-theme = "~1.0.0"
+commitizen = ">= 3.5.4"
+pre-commit = ">= 3.3.3"
+pylint = ">= 2.17.5"
+pytest = ">= 7.4.0"
+sphinx = ">= 6.2"  # let higher dependencies figure
+sphinx-rtd-theme = ">= 1.2.2"
+
 
 [build-system]
-requires = ["poetry-core"]
+requires = [
+  "poetry-core >= 1.6.1",
+]
 build-backend = "poetry.core.masonry.api"
 
+
 [tool.pylint.format]
 max-line-length = 120