'ssgseaParam' is not an exported object from 'namespace:GSVA'

[FLY-Fiancee]

I used an annotated single-cell data from seurat, but the following problems occurred when using scgsva:
'ssgseaParam' is not an exported object from 'namespace:GSVA'
my codes：`set.seed(123)
library(scGSVA)

anno <- buildAnnot(species="human", keytype="SYMBOL", anntype="KEGG")
res <- scgsva(seurat_object.filt.filt, anno,cores = 60)
`

[guokai8]

Hi @FLY-Fiancee ,
Which version of GSVA do you have? You may need to install the newest GSVA package. Or you can go with the previous scGSVA package.
K

[zhoujiaqi704]

Hi! I meet the same error when I run the example data: Error: 'ssgseaParam' is not an exported object from 'namespace:GSVA'.
The package version is "0.0.22".

[guokai8]

Hi @zhoujiaqi704,
Please go with the newest version of GSVA package
K

[honghh2018]

I get the same error,
version was latest 0.0.22
but still get error

How to fix this issue?
Any advice would be appreciated

[guokai8]

@honghh2018,
Please try below:

BiocManager::install("GSVA", version = "devel")