Update README.md

README.md

@@ -1,14 +1,12 @@
-## Transcriptome annotation using nanopore sequencing
+## Full-length transcript prediction using nanopore sequencing
 
-Pipeline for transcriptome annotation of genomes using nanopore sequencing technology
-
-This project is in process, and documentation and description are still improving.
+Pipeline for transcript prediction of the chicken genome using nanopore sequencing technology
 
 ## Data preparation
 To run this pipeline, following files should be prepared:
   1. Reference genome:
       * fasta: Gallus_gallus.GRCg6a.dna_sm.toplevel.fa
-      * gtf: Gallus_gallus.GRCg6a.103.gtf
+      * gtf: Gallus_gallus.GRCg6a.102.gtf
   2. Fastq files:
       * tissue_sampleid.fq.gz
 
@@ -19,3 +17,5 @@ N.B. The file can not be compressed, otherwise NanoPlot would report errors
 
 ## Running the pipeline
 sbatch nanopore_ann_run.sh
+
+N.B. The pipeline is currently configured on UC DAVIS FARM server, which will be updated in the future.