Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Jump to bottom

⬆️ Combi update #1363

Merged
merged 8 commits into from
Oct 11, 2023
Merged

⬆️ Combi update #1363

merged 8 commits into from
Oct 11, 2023

Conversation

jsnel
Copy link
Member

@jsnel jsnel commented Oct 11, 2023

Combining runtime updates for:

  • numda
  • pandas
  • pydantic
  • xarray
  • sdtfile
  • ruamel-yaml

And an update to docs/requirements.txt for:

  • pillow

dependabot bot and others added 7 commits October 11, 2023 19:01
@dependabot @jsnel
Bump numba from 0.57.1 to 0.58.0
7aac671 
Bumps [numba](https://github.com/numba/numba) from 0.57.1 to 0.58.0.
- [Release notes](https://github.com/numba/numba/releases)
- [Commits](numba/numba@0.57.1...0.58.0)

---
updated-dependencies:
- dependency-name: numba
  dependency-type: direct:development
  update-type: version-update:semver-minor
...

Signed-off-by: dependabot[bot] <[email protected]>
@dependabot @jsnel
Bump pandas from 2.1.0 to 2.1.1
0eaa3a5 
Bumps [pandas](https://github.com/pandas-dev/pandas) from 2.1.0 to 2.1.1.
- [Release notes](https://github.com/pandas-dev/pandas/releases)
- [Commits](pandas-dev/pandas@v2.1.0...v2.1.1)

---
updated-dependencies:
- dependency-name: pandas
  dependency-type: direct:development
  update-type: version-update:semver-patch
...

Signed-off-by: dependabot[bot] <[email protected]>
@snyk-bot @jsnel
fix: docs/requirements.txt to reduce vulnerabilities
f2af432 
The following vulnerabilities are fixed by pinning transitive dependencies:
- https://snyk.io/vuln/SNYK-PYTHON-PILLOW-5918878
@jsnel
Bump pydantic from 1.10.12 to 1.10.13
f2b6691 
Bumps [pydantic](https://github.com/pydantic/pydantic) from 1.10.12 to 1.10.13.
- [Release notes](https://github.com/pydantic/pydantic/releases)
- [Changelog](https://github.com/pydantic/pydantic/blob/main/HISTORY.md)
- [Commits](pydantic/pydantic@v1.10.12...v1.10.13)

---
updated-dependencies:
- dependency-name: pydantic
  dependency-type: direct:development
  update-type: version-update:semver-patch
...

Signed-off-by: dependabot[bot] <[email protected]>
@dependabot @jsnel
Bump xarray from 2023.8.0 to 2023.9.0
eb968d5 
Bumps [xarray](https://github.com/pydata/xarray) from 2023.8.0 to 2023.9.0.
- [Release notes](https://github.com/pydata/xarray/releases)
- [Changelog](https://github.com/pydata/xarray/blob/main/HOW_TO_RELEASE.md)
- [Commits](pydata/xarray@v2023.08.0...v2023.09.0)

---
updated-dependencies:
- dependency-name: xarray
  dependency-type: direct:development
  update-type: version-update:semver-minor
...

Signed-off-by: dependabot[bot] <[email protected]>
@dependabot @jsnel
Bump sdtfile from 2023.8.30 to 2023.9.28
564fa36 
Bumps [sdtfile](https://github.com/cgohlke/sdtfile) from 2023.8.30 to 2023.9.28.
- [Changelog](https://github.com/cgohlke/sdtfile/blob/master/CHANGES.rst)
- [Commits](cgohlke/sdtfile@v2023.8.30...v2023.9.28)

---
updated-dependencies:
- dependency-name: sdtfile
  dependency-type: direct:development
  update-type: version-update:semver-minor
...

Signed-off-by: dependabot[bot] <[email protected]>
@jsnel
Bump ruamel-yaml from 0.17.32 to 0.17.35
f603deb 
Bumps [ruamel-yaml](https://sourceforge.net/p/ruamel-yaml/code/ci/default/tree) from 0.17.32 to 0.17.35.

---
updated-dependencies:
- dependency-name: ruamel-yaml
  dependency-type: direct:development
  update-type: version-update:semver-patch
...

Signed-off-by: dependabot[bot] <[email protected]>
@jsnel jsnel requested a review from a team as a code owner October 11, 2023 17:36
@github-actions
Copy link
Contributor

Binder 👈 Launch a binder notebook on branch jsnel/pyglotaran/combi_update

@github-actions
Copy link
Contributor

github-actions bot commented Oct 11, 2023 •
edited
Loading

Benchmark is done. Checkout the benchmark result page.
Benchmark differences below 5% might be due to CI noise.

Benchmark diff v0.7.1 vs. main 

All benchmarks:

| Change   | Before [535acaaa] <v0.7.1>   | After [1712073b]    |   Ratio | Benchmark (Parameter)                   |
|----------|------------------------------|---------------------|---------|-----------------------------------------|
|          | 219M                         | 219M                |    1    | IntegrationTwoDatasets.peakmem_optimize |
|          | 1.42±0.08s                   | 1.47±0.06s          |    1.03 | IntegrationTwoDatasets.time_optimize    |
Benchmark diff main vs. PR 

All benchmarks:

| Change   | Before [1712073b]    | After [56ab9456]    |   Ratio | Benchmark (Parameter)                   |
|----------|----------------------|---------------------|---------|-----------------------------------------|
|          | 219M                 | 217M                |    0.99 | IntegrationTwoDatasets.peakmem_optimize |
|          | 1.47±0.06s           | 1.43±0.06s          |    0.98 | IntegrationTwoDatasets.time_optimize    |

@codecov
Copy link

codecov bot commented Oct 11, 2023 •
edited
Loading

Codecov Report

All modified lines are covered by tests ✅

Files Coverage Δ
glotaran/builtin/io/yml/utils.py 100.0% <ø> (ø)

📢 Thoughts on this report? Let us know!.

@sonarqubecloud
Copy link

Kudos, SonarCloud Quality Gate passed!    Quality Gate passed

Bug A 0 Bugs
Vulnerability A 0 Vulnerabilities
Security Hotspot A 0 Security Hotspots
Code Smell A 0 Code Smells

No Coverage information No Coverage information
0.0% 0.0% Duplication

s-weigand
s-weigand approved these changes Oct 11, 2023
View reviewed changes
Copy link
Member

@s-weigand s-weigand left a comment

Choose a reason for hiding this comment

The reason will be displayed to describe this comment to others. Learn more.

LGTM 👍

@s-weigand s-weigand merged commit 529a1b7 into glotaran:main Oct 11, 2023
@s-weigand s-weigand deleted the combi_update branch October 11, 2023 19:04
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Reviewers

@s-weigand s-weigand s-weigand approved these changes

Assignees
No one assigned
Labels
None yet
Projects
None yet
Milestone
No milestone
Development

Successfully merging this pull request may close these issues.
3 participants
@jsnel @s-weigand @snyk-bot