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1. vgp-assembly vgp-assembly Public

   Forked from VGP/vgp-assembly

   VGP repository for the genome assembly working group

   Shell

2. yahs yahs Public

   Forked from c-zhou/yahs

   Yet another Hi-C scaffolding tool

   C

3. EARs EARs Public

   Forked from ERGA-consortium/EARs

   The ERGA Assembly Reports repository

   Python

4. assembly_pipeline assembly_pipeline Public

   Forked from cnag-aat/assembly_pipeline

   v2.2.0 of the pipeline used for de novo genome assembly @CNAG

   Python

5. FOAM FOAM Public

   Forked from cnag-aat/FOAM

   FOAM (Flye ONT Assembly of Mitogenomes). Is a pipeline we are using to assemble the mitogenome of different organisms using ONT and Illumina reads. As each genome and sample poses different challen…

   Python