Be more forgiving of incorrect SampleFormat length #363
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…alues populated, such as in bioformats ome tif files
jeffpeck10x
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Seems related/similar to #303 |
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This is to address the issue noted in:
#159
and allows geotiff to handle a situation where there is an interleaved tiff that has
SampleFormatof[1], despite there being multiple samples per channel.The situation described in the issue is that
BitsPerSampleis[8, 8, 8], yetSampleFormatis only[1], whereas it should have the same number of values (i.e.[1, 1, 1]). Rather than fail in this situation, be more forgiving of the incorrect format and try to infer from the value that was set.This was noticed in some OME-TIFF files generated by qupath with
Creator="OME Bio-Formats 6.11.1"in the OME-XML. These files can be opened by qupath, FIJI, and Python's tifffie, so it only makes sense thatgeotiff.jsshould handle them as well, despite the incorrectSampleFormatlength.