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[create-pull-request] automated change (#29006)
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Co-authored-by: balhoff <[email protected]>
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@ontobot @balhoff
ontobot and balhoff authored Oct 3, 2024
1 parent 9810272 commit 1a9d29d
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Showing 7 changed files with 3 additions and 39 deletions.
2 changes: 1 addition & 1 deletion docs/patterns/multi_organism_process.md
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## Equivalent to

`{process}` and ([bearer of](http://purl.obolibrary.org/obo/RO_0000053) some [PATO_0002486](http://purl.obolibrary.org/obo/PATO_0002486))
`{process}` and ([has characteristic](http://purl.obolibrary.org/obo/RO_0000053) some [PATO_0002486](http://purl.obolibrary.org/obo/PATO_0002486))



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2 changes: 1 addition & 1 deletion docs/patterns/protein_complex_by_activity.md
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## Equivalent to

[protein-containing complex](http://purl.obolibrary.org/obo/GO_0032991) and ([capable of](http://purl.obolibrary.org/obo/RO_0002215) some `{function}`)
[protein-containing complex](http://purl.obolibrary.org/obo/GO_0032991) and ([capable_of](http://purl.obolibrary.org/obo/RO_0002215) some `{function}`)



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2 changes: 1 addition & 1 deletion docs/patterns/single_organism_process.md
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## Equivalent to

`{process}` and ([bearer of](http://purl.obolibrary.org/obo/RO_0000053) some [single organismal process quality](http://purl.obolibrary.org/obo/PATO_0002487))
`{process}` and ([has characteristic](http://purl.obolibrary.org/obo/RO_0000053) some [single organismal process quality](http://purl.obolibrary.org/obo/PATO_0002487))



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3 changes: 0 additions & 3 deletions src/design_patterns/negative_regulation.tsv
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Expand Up @@ -825,9 +825,6 @@ http://purl.obolibrary.org/obo/GO_2000955 negative regulation of cyclodextrin me
http://purl.obolibrary.org/obo/GO_1904042 negative regulation of cystathionine beta-synthase activity http://purl.obolibrary.org/obo/GO_0004122 cystathionine beta-synthase activity
http://purl.obolibrary.org/obo/GO_1901495 negative regulation of cysteine metabolic process http://purl.obolibrary.org/obo/GO_0006534 cysteine metabolic process
http://purl.obolibrary.org/obo/GO_2000117 negative regulation of cysteine-type endopeptidase activity http://purl.obolibrary.org/obo/GO_0004197 cysteine-type endopeptidase activity
http://purl.obolibrary.org/obo/GO_0043154 negative regulation of cysteine-type endopeptidase activity involved in apoptotic process http://purl.obolibrary.org/obo/GO_0097153 cysteine-type endopeptidase activity involved in apoptotic process
http://purl.obolibrary.org/obo/GO_2001268 negative regulation of cysteine-type endopeptidase activity involved in apoptotic signaling pathway http://purl.obolibrary.org/obo/GO_0097199 cysteine-type endopeptidase activity involved in apoptotic signaling pathway
http://purl.obolibrary.org/obo/GO_2001271 negative regulation of cysteine-type endopeptidase activity involved in execution phase of apoptosis http://purl.obolibrary.org/obo/GO_0097200 cysteine-type endopeptidase activity involved in execution phase of apoptosis
http://purl.obolibrary.org/obo/GO_0060302 negative regulation of cytokine activity http://purl.obolibrary.org/obo/GO_0005125 cytokine activity
http://purl.obolibrary.org/obo/GO_0001818 negative regulation of cytokine production http://purl.obolibrary.org/obo/GO_0001816 cytokine production
http://purl.obolibrary.org/obo/GO_0002719 negative regulation of cytokine production involved in immune response http://purl.obolibrary.org/obo/GO_0002367 cytokine production involved in immune response
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3 changes: 0 additions & 3 deletions src/design_patterns/positive_regulation.tsv
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Expand Up @@ -817,9 +817,6 @@ http://purl.obolibrary.org/obo/GO_2000959 positive regulation of cyclodextrin ca
http://purl.obolibrary.org/obo/GO_2000956 positive regulation of cyclodextrin metabolic process http://purl.obolibrary.org/obo/GO_2000900 cyclodextrin metabolic process
http://purl.obolibrary.org/obo/GO_1901496 positive regulation of cysteine metabolic process http://purl.obolibrary.org/obo/GO_0006534 cysteine metabolic process
http://purl.obolibrary.org/obo/GO_2001056 positive regulation of cysteine-type endopeptidase activity http://purl.obolibrary.org/obo/GO_0004197 cysteine-type endopeptidase activity
http://purl.obolibrary.org/obo/GO_0043280 positive regulation of cysteine-type endopeptidase activity involved in apoptotic process http://purl.obolibrary.org/obo/GO_0097153 cysteine-type endopeptidase activity involved in apoptotic process
http://purl.obolibrary.org/obo/GO_2001269 positive regulation of cysteine-type endopeptidase activity involved in apoptotic signaling pathway http://purl.obolibrary.org/obo/GO_0097199 cysteine-type endopeptidase activity involved in apoptotic signaling pathway
http://purl.obolibrary.org/obo/GO_2001272 positive regulation of cysteine-type endopeptidase activity involved in execution phase of apoptosis http://purl.obolibrary.org/obo/GO_0097200 cysteine-type endopeptidase activity involved in execution phase of apoptosis
http://purl.obolibrary.org/obo/GO_1904960 positive regulation of cytochrome-c oxidase activity http://purl.obolibrary.org/obo/GO_0004129 cytochrome-c oxidase activity
http://purl.obolibrary.org/obo/GO_0060301 positive regulation of cytokine activity http://purl.obolibrary.org/obo/GO_0005125 cytokine activity
http://purl.obolibrary.org/obo/GO_0001819 positive regulation of cytokine production http://purl.obolibrary.org/obo/GO_0001816 cytokine production
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3 changes: 0 additions & 3 deletions src/design_patterns/regulation.tsv
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Expand Up @@ -944,9 +944,6 @@ http://purl.obolibrary.org/obo/GO_2000954 regulation of cyclodextrin metabolic p
http://purl.obolibrary.org/obo/GO_1904041 regulation of cystathionine beta-synthase activity http://purl.obolibrary.org/obo/GO_0004122 cystathionine beta-synthase activity
http://purl.obolibrary.org/obo/GO_1901494 regulation of cysteine metabolic process http://purl.obolibrary.org/obo/GO_0006534 cysteine metabolic process
http://purl.obolibrary.org/obo/GO_2000116 regulation of cysteine-type endopeptidase activity http://purl.obolibrary.org/obo/GO_0004197 cysteine-type endopeptidase activity
http://purl.obolibrary.org/obo/GO_0043281 regulation of cysteine-type endopeptidase activity involved in apoptotic process http://purl.obolibrary.org/obo/GO_0097153 cysteine-type endopeptidase activity involved in apoptotic process
http://purl.obolibrary.org/obo/GO_2001267 regulation of cysteine-type endopeptidase activity involved in apoptotic signaling pathway http://purl.obolibrary.org/obo/GO_0097199 cysteine-type endopeptidase activity involved in apoptotic signaling pathway
http://purl.obolibrary.org/obo/GO_2001270 regulation of cysteine-type endopeptidase activity involved in execution phase of apoptosis http://purl.obolibrary.org/obo/GO_0097200 cysteine-type endopeptidase activity involved in execution phase of apoptosis
http://purl.obolibrary.org/obo/GO_1904959 regulation of cytochrome-c oxidase activity http://purl.obolibrary.org/obo/GO_0004129 cytochrome-c oxidase activity
http://purl.obolibrary.org/obo/GO_0060300 regulation of cytokine activity http://purl.obolibrary.org/obo/GO_0005125 cytokine activity
http://purl.obolibrary.org/obo/GO_0001817 regulation of cytokine production http://purl.obolibrary.org/obo/GO_0001816 cytokine production
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27 changes: 0 additions & 27 deletions src/ontology/imports/go-pattern-conformance.ttl
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<http://purl.obolibrary.org/obo/GO_0043151> <http://purl.org/dc/terms/conformsTo> <http://purl.obolibrary.org/obo/go/patterns/involved_in_x_y.yaml> .


<http://purl.obolibrary.org/obo/GO_0043154> <http://purl.org/dc/terms/conformsTo> <http://purl.obolibrary.org/obo/go/patterns/negative_regulation.yaml> .


<http://purl.obolibrary.org/obo/GO_0043155> <http://purl.org/dc/terms/conformsTo> <http://purl.obolibrary.org/obo/go/patterns/negative_regulation.yaml> .


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<http://purl.obolibrary.org/obo/GO_0043279> <http://purl.org/dc/terms/conformsTo> <http://purl.obolibrary.org/obo/go/patterns/response_to_stimulus_by_stimulus.yaml> .


<http://purl.obolibrary.org/obo/GO_0043280> <http://purl.org/dc/terms/conformsTo> <http://purl.obolibrary.org/obo/go/patterns/positive_regulation.yaml> .


<http://purl.obolibrary.org/obo/GO_0043281> <http://purl.org/dc/terms/conformsTo> <http://purl.obolibrary.org/obo/go/patterns/regulation.yaml> .


<http://purl.obolibrary.org/obo/GO_0043282> <http://purl.org/dc/terms/conformsTo> <http://purl.obolibrary.org/obo/go/patterns/anatomical_structure_development.yaml> .


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<http://purl.obolibrary.org/obo/GO_2001266> <http://purl.org/dc/terms/conformsTo> <http://purl.obolibrary.org/obo/go/patterns/involved_in_x_y.yaml> .


<http://purl.obolibrary.org/obo/GO_2001267> <http://purl.org/dc/terms/conformsTo> <http://purl.obolibrary.org/obo/go/patterns/regulation.yaml> .


<http://purl.obolibrary.org/obo/GO_2001268> <http://purl.org/dc/terms/conformsTo> <http://purl.obolibrary.org/obo/go/patterns/negative_regulation.yaml> .


<http://purl.obolibrary.org/obo/GO_2001269> <http://purl.org/dc/terms/conformsTo> <http://purl.obolibrary.org/obo/go/patterns/positive_regulation.yaml> .


<http://purl.obolibrary.org/obo/GO_2001270> <http://purl.org/dc/terms/conformsTo> <http://purl.obolibrary.org/obo/go/patterns/regulation.yaml> .


<http://purl.obolibrary.org/obo/GO_2001271> <http://purl.org/dc/terms/conformsTo> <http://purl.obolibrary.org/obo/go/patterns/negative_regulation.yaml> .


<http://purl.obolibrary.org/obo/GO_2001272> <http://purl.org/dc/terms/conformsTo> <http://purl.obolibrary.org/obo/go/patterns/positive_regulation.yaml> .


<http://purl.obolibrary.org/obo/GO_2001276> <http://purl.org/dc/terms/conformsTo> <http://purl.obolibrary.org/obo/go/patterns/regulation.yaml> ,
<http://purl.obolibrary.org/obo/go/patterns/regulation_by.yaml> .

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