CI - with Numpy/Scipy nightly wheels (nightly) #13
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| name: CI - with Numpy/Scipy nightly wheels (nightly) | |
| # This configures a github action that runs the JAX test suite against nightly development builds | |
| # of numpy and scipy, in order to catch issues with new package versions prior to their release. | |
| # Unlike our other CI, this is one that we expect to fail frequently, and so we don't run it against | |
| # every commit and PR in the repository. Rather, we run it on a schedule, and failures lead to an | |
| # issue being created or updated. | |
| # Portions of this adapted from https://github.com/pydata/xarray/blob/main/.github/workflows/upstream-dev-ci.yaml | |
| concurrency: | |
| group: ${{ github.workflow }}-${{ github.ref }} | |
| cancel-in-progress: true | |
| on: | |
| schedule: | |
| - cron: "0 12 * * *" # Daily at 12:00 UTC | |
| workflow_dispatch: # allows triggering the workflow run manually | |
| pull_request: # Automatically trigger on pull requests affecting this file | |
| branches: | |
| - main | |
| paths: | |
| - '**workflows/upstream-nightly.yml' | |
| jobs: | |
| upstream-dev: | |
| runs-on: ubuntu-20.04-16core | |
| permissions: | |
| contents: read | |
| checks: write # for upload-artifact | |
| defaults: | |
| run: | |
| shell: bash -l {0} | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| python-version: ["3.12"] | |
| outputs: | |
| artifacts_availability: ${{ steps.status.outputs.ARTIFACTS_AVAILABLE }} | |
| steps: | |
| - uses: actions/checkout@b4ffde65f46336ab88eb53be808477a3936bae11 # ratchet:actions/checkout@v4 | |
| - name: Set up Python ${{ matrix.python-version }} | |
| uses: actions/setup-python@39cd14951b08e74b54015e9e001cdefcf80e669f # ratchet:actions/setup-python@v5 | |
| with: | |
| python-version: ${{ matrix.python-version }} | |
| - name: Install JAX test requirements | |
| run: | | |
| pip install -r build/test-requirements.txt | |
| pip install pytest-reportlog | |
| - name: Install numpy & scipy development versions | |
| run: | | |
| pip install \ | |
| -i https://pypi.anaconda.org/scientific-python-nightly-wheels/simple \ | |
| --no-deps \ | |
| --pre \ | |
| --upgrade \ | |
| numpy \ | |
| scipy | |
| python -c "import numpy; print(f'{numpy.__version__=}')" | |
| python -c "import scipy; print(f'{scipy.__version__=}')" | |
| - name: Install JAX | |
| run: | | |
| pip install .[ci] | |
| - name: Run tests | |
| if: success() | |
| id: status | |
| env: | |
| JAX_NUM_GENERATED_CASES: 1 | |
| JAX_ENABLE_X64: true | |
| JAX_ENABLE_CHECKS: true | |
| JAX_SKIP_SLOW_TESTS: true | |
| PY_COLORS: 1 | |
| run: | | |
| echo "JAX_NUM_GENERATED_CASES=$JAX_NUM_GENERATED_CASES" | |
| echo "JAX_ENABLE_X64=$JAX_ENABLE_X64" | |
| echo "JAX_ENABLE_CHECKS=$JAX_ENABLE_CHECKS" | |
| echo "JAX_SKIP_SLOW_TESTS=$JAX_SKIP_SLOW_TESTS" | |
| pytest -n auto --tb=short -rf --maxfail=20 \ | |
| --report-log output-${{ matrix.python-version }}-log.jsonl \ | |
| tests \ | |
| || ( | |
| echo 'ARTIFACTS_AVAILABLE=true' >> $GITHUB_OUTPUT && false | |
| ) | |
| - name: Upload artifacts | |
| if: | | |
| failure() | |
| && steps.status.outcome == 'failure' | |
| && github.event_name == 'schedule' | |
| && github.repository == 'google/jax' | |
| uses: actions/upload-artifact@834a144ee995460fba8ed112a2fc961b36a5ec5a # ratchet: actions/upload-artifact@v4 | |
| with: | |
| name: output-${{ matrix.python-version }}-log.jsonl | |
| path: output-${{ matrix.python-version }}-log.jsonl | |
| retention-days: 5 | |
| report: | |
| name: report | |
| needs: upstream-dev | |
| permissions: | |
| contents: read | |
| issues: write | |
| if: | | |
| failure() | |
| && github.event_name == 'schedule' | |
| && needs.upstream-dev.outputs.artifacts_availability == 'true' | |
| runs-on: ubuntu-latest | |
| defaults: | |
| run: | |
| shell: bash | |
| steps: | |
| - uses: actions/checkout@b4ffde65f46336ab88eb53be808477a3936bae11 # ratchet:actions/checkout@v4 | |
| - uses: actions/setup-python@39cd14951b08e74b54015e9e001cdefcf80e669f # ratchet:actions/setup-python@v5 | |
| with: | |
| python-version: "3.x" | |
| - uses: actions/download-artifact@fa0a91b85d4f404e444e00e005971372dc801d16 # ratchet:actions/download-artifact@v4 | |
| with: | |
| path: /tmp/workspace/logs | |
| - name: install requirements | |
| run: | | |
| python -m pip install pytest | |
| - name: Move all log files into a single directory | |
| run: | | |
| rsync -a /tmp/workspace/logs/output-*/ ./logs | |
| ls -R ./logs | |
| cat logs/*.jsonl > pytest-logs.txt | |
| python .github/workflows/parse_logs.py pytest-logs.txt --outfile=parsed-logs.txt | |
| - name: Report failures | |
| uses: actions/github-script@60a0d83039c74a4aee543508d2ffcb1c3799cdea # ratchet:actions/github-script@v7 | |
| with: | |
| github-token: ${{ secrets.GITHUB_TOKEN }} | |
| script: | | |
| const fs = require('fs'); | |
| const parsed_logs = fs.readFileSync('parsed-logs.txt', 'utf8'); | |
| const title = "⚠️ Nightly upstream-dev CI failed ⚠️" | |
| const workflow_url = `https://github.com/${process.env.GITHUB_REPOSITORY}/actions/runs/${process.env.GITHUB_RUN_ID}` | |
| const issue_body = `[Workflow Run URL](${workflow_url})\n${parsed_logs}` | |
| // Run GraphQL query against GitHub API to find the most recent open issue used for reporting failures | |
| const query = `query($owner:String!, $name:String!, $creator:String!, $label:String!){ | |
| repository(owner: $owner, name: $name) { | |
| issues(first: 1, states: OPEN, filterBy: {createdBy: $creator, labels: [$label]}, orderBy: {field: CREATED_AT, direction: DESC}) { | |
| edges { | |
| node { | |
| body | |
| id | |
| number | |
| } | |
| } | |
| } | |
| } | |
| }`; | |
| const variables = { | |
| owner: context.repo.owner, | |
| name: context.repo.repo, | |
| label: 'CI', | |
| creator: "github-actions[bot]" | |
| } | |
| const result = await github.graphql(query, variables) | |
| // If no issue is open, create a new issue, | |
| // else update the body of the existing issue. | |
| if (result.repository.issues.edges.length === 0) { | |
| github.rest.issues.create({ | |
| owner: variables.owner, | |
| repo: variables.name, | |
| body: issue_body, | |
| title: title, | |
| labels: [variables.label] | |
| }) | |
| } else { | |
| github.rest.issues.update({ | |
| owner: variables.owner, | |
| repo: variables.name, | |
| issue_number: result.repository.issues.edges[0].node.number, | |
| body: issue_body | |
| }) | |
| } |