cleaup notebooks

fractal-analytics-platform · Oct 3, 2024 · c81ae61 · c81ae61
1 parent 98dcad4
commit c81ae61
Show file tree

Hide file tree

Showing 2 changed files with 20 additions and 4 deletions.
diff --git a/docs/notebooks/basic_usage.ipynb b/docs/notebooks/basic_usage.ipynb
@@ -132,7 +132,7 @@
    "source": [
     "# Loading a table\n",
     "feature_table = ngff_image.table.get(\"regionprops_DAPI\")\n",
-    "feature_table.data_frame"
+    "feature_table.table"
    ]
   },
   {
@@ -147,7 +147,7 @@
     "print(f\"{roi_table.list_field_indexes=}\")\n",
     "print(f\"{roi_table.get_roi(\"FOV_1\")=}\")\n",
     "\n",
-    "roi_table.data_frame"
+    "roi_table.table"
    ]
   },
   {
@@ -174,6 +174,13 @@
     "print(f\"{new_ngff_image.levels_paths=}\")\n",
     "print(f\"{new_ngff_image.num_levels=}\")"
    ]
+  },
+  {
+   "cell_type": "code",
+   "execution_count": null,
+   "metadata": {},
+   "outputs": [],
+   "source": []
   }
  ],
  "metadata": {

diff --git a/docs/notebooks/image.ipynb b/docs/notebooks/image.ipynb
@@ -291,7 +291,7 @@
     "            {\"label\": nuclei_id,\n",
     "             \"feat1\": np.random.rand(),\n",
     "             \"feat2\": np.random.rand(),\n",
-    "         \"ROI\": roi.field_index}\n",
+    "         \"ROI\": roi.infos.get(\"field_index\")}\n",
     "    )\n",
     "\n",
     "feat_df = pd.DataFrame.from_records(list_of_records)\n",
@@ -304,8 +304,17 @@
     "\n",
     "print(f\"New list of feature table: {ngff_image.table.list(type='feature_table')}\")\n",
     "feat_table.table = feat_df\n",
-    "feat_table.write()"
+    "feat_table.write()\n",
+    "\n",
+    "feat_table.table"
    ]
+  },
+  {
+   "cell_type": "code",
+   "execution_count": null,
+   "metadata": {},
+   "outputs": [],
+   "source": []
   }
  ],
  "metadata": {