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Auto-generated via {sandpaper} Source : 8ba98d6 Branch : md-outputs Author : GitHub Actions <[email protected]> Time : 2023-12-21 14:08:01 +0000 Message : markdown source builds Auto-generated via {sandpaper} Source : 5c76e4e Branch : main Author : Amanda Minter <[email protected]> Time : 2023-12-21 14:05:03 +0000 Message : update late tasks from feedback (#85) * Extend challenge in 'Choosing an appropriate model' * Edit to accounting for uncertainty example Store all results and then extract infectious compartment for plotting * Add detail to Ebola case study challenge * update glossary entries * Add callout on ODE solver * clarify purpose of concept dependencies * Updates from review * Remove infection object * Update simulating-transmission.Rmd * Update model-choices.Rmd * Add exercise to `compare_interventions.Rmd` * update modelling interventions after review * Update renv.lock * update plots * make uncertainty plots consistent across episodes * fix broken link * making plots consistent across tutorials * update summary and key points * update plots and add challenge * update introduction * move contact matrix callout and clarify reduction is performed within the model functions * add callout on intervention types * update introduction and reorder text in other sections * update PI section * style code * spell check * Update compare-interventions.Rmd * Apply suggestions from code review Co-authored-by: Andree Valle Campos <[email protected]> * Update episodes/modelling-interventions.Rmd Co-authored-by: Andree Valle Campos <[email protected]> * add dropdown menus to make section more interactive * add reminder about transmissibility calculation * link to latent period * update model terms * add note on flow diagram * add callout on model rates * Update episodes/simulating-transmission.Rmd Co-authored-by: Andree Valle Campos <[email protected]> * Update episodes/simulating-transmission.Rmd Co-authored-by: Andree Valle Campos <[email protected]> * Update episodes/simulating-transmission.Rmd Co-authored-by: Andree Valle Campos <[email protected]> * Update episodes/simulating-transmission.Rmd Co-authored-by: Andree Valle Campos <[email protected]> * Update episodes/simulating-transmission.Rmd Co-authored-by: Andree Valle Campos <[email protected]> * update tutorial objectives * distinguish parameter definitions from process descriptions in flow diagram * Update model-choices.Rmd * remove pak call from set up * Update renv.lock --------- Co-authored-by: Andree Valle Campos <[email protected]>
epiverse-trace · Dec 21, 2023 · d32c1af · d32c1af
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