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Fix URLs
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jamesmbaazam committed Oct 7, 2024
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6 changes: 3 additions & 3 deletions README.Rmd
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Expand Up @@ -36,7 +36,7 @@ models are often used in infectious disease epidemiology, where the chains repre
transmission, and the offspring distribution represents the distribution of
secondary infections caused by an infected individual.

_{{ packagename }}_ re-implements [bpmodels](https://github.com/epiverse-trace/bpmodels/)
_{{ packagename }}_ re-implements [bpmodels](https://github.com/epiforecasts/bpmodels/)
by providing bespoke functions and data structures that allow easy
manipulation and interoperability with other Epiverse-TRACE packages, for example, [superspreading](https://github.com/epiverse-trace/superspreading/) and [epiparameter](https://github.com/epiverse-trace/epiparameter/), and potentially some existing packages for handling transmission chains, for example, [epicontacts](https://github.com/reconhub/epicontacts).

Expand Down Expand Up @@ -184,9 +184,9 @@ processes and transmission chains.

<summary>Click to expand</summary>

* [bpmodels](https://github.com/epiverse-trace/bpmodels): provides methods
* [bpmodels](https://github.com/epiforecasts/bpmodels/): provides methods
for analysing the size and length of transmission chains from branching
process models. `{epichains}` is intended to supersede `{bpmodels}`.
process models. `{epichains}` supersedes `{bpmodels}`, which has been retired.

* [ringbp](https://github.com/epiforecasts/ringbp): a branching process
model, parameterised to the 2019-nCoV outbreak, and used to quantify
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9 changes: 4 additions & 5 deletions README.md
Original file line number Diff line number Diff line change
Expand Up @@ -26,7 +26,7 @@ distribution represents the distribution of secondary infections caused
by an infected individual.

*epichains* re-implements
[bpmodels](https://github.com/epiverse-trace/bpmodels/) by providing
[bpmodels](https://github.com/epiforecasts/bpmodels/) by providing
bespoke functions and data structures that allow easy manipulation and
interoperability with other Epiverse-TRACE packages, for example,
[superspreading](https://github.com/epiverse-trace/superspreading/) and
Expand Down Expand Up @@ -232,10 +232,9 @@ branching processes and transmission chains.
Click to expand
</summary>

- [bpmodels](https://github.com/epiverse-trace/bpmodels): provides
methods for analysing the size and length of transmission chains from
branching process models. `{epichains}` is intended to supersede
`{bpmodels}`.
- [bpmodels](https://github.com/epiforecasts/bpmodels/): provides methods
for analysing the size and length of transmission chains from branching
process models. `{epichains}` supersedes `{bpmodels}`, which has been retired.

- [ringbp](https://github.com/epiforecasts/ringbp): a branching process
model, parameterised to the 2019-nCoV outbreak, and used to quantify
Expand Down

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